Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0587 ATGGATTCTAAGCCTACCCATTTTGCCAAGCCTCCATCTCTCAACGATGAAACAACCTCTGTCCTTGAGCCCAGCCCTTTTCGAAAACTCGTCATCGTTGCTTCCATTGCCACCGGAATCAACTTCGGATGGGCTCTTCAGCTCTCCCTGTTGACTCCATATGTCCAGCTCCTTGGTATCTCCCACACCATGGCCCCTTTCATATGGCTATGCGGCCCAATCTCTGGCCTCATTGTTCAGCCCATTGTTGGTTACTACAGTGACCGTTGCAAATCCCGATTCGGCAAACGACGTCCGTTCATTGCTGCTGGTGCTCTTTTTGTTGCCTTGGCTGTTTTCGTGATCAGTTATACCGCTGATCTCGGCCACATGTTTGGCGACTCATTGCAAGAGAAATCACGGCCTCGTGCCATTGCTATCTTCATCATCGGATTTTGGATCCTAGATGTCTCCAACAACGTGCTACAAGGTCCTTGTCGTGCTCTCCTTGCAGACCTGTCCGCCGGTGACCAGAGGAAGACGAGCATGTCGAATGCGCTTTTCTCGTTCTTCATGGCCGTCGGAAAAATTCTTGGTTATGCAGCCGGATCGTACGACGGCCTCCACAAGATCTTCCCATTTACAGACACGAAAGCCTGCGACAAGTACTGCGCAAACCTCAAGAGCTGCTTCTTCATCTCAATTGCGTTACTAGCATGTCTTGCCACAGTGGCGCTGATCTACGTGAAGGAGAATATTCCATCGTCATCCCTAGCAACGCCAGAGAATAAAGGAAGTGGTGAGAACTCGGGCGATGATTCAGTGGAAGAGGGAGATGGGGGATTACCGTGTTTTGGACAGATGTTCGGTGCATTCCGTGATCTTAAGAGGCCAATGTGGATTTTACTTCTGGTGACGTGTCTCAATTGGATTGGTTGGTTCCCTTTCGTGTTGTTCAACACTGATTGGATGGGGAAAGAGGTGTACGGAGGAACAGTTGGGGAAGGGAATGCGTACAATAATGGTGTGCACGCGGGAGCATTGGGTCTTATGATCCAATCAATTGTGCTGGGACTGGTGTCGTTGGGAGTAAATGTGTTGGCGCGCGGGGTTGGGGGCGTGAAGATGCTATGGGGAATCGTTAACTTCTTGCTTGCGATCTGTTTGGCATTGACGGTGTTGATCACCAATATGGCAGAGCATACACGGCATTTCCCTCCGAACTCTACCGACCCTCTCCCACCTGTCACTAGCGTTAAGGCCAGCGCCTTAGCGCTTTTTGCTGTCCTTGGAATTCCTCTCGCGATTACTTACAGTGTCCCTTTTGCTCTCGCATCCATATTCTCCAACACTAGTGGGGCAGGCCAAGGATTATCTTTGGGAGTTCTCAATATCTCAATTTGCATACCACAGatgttCGTGTCTTTTGTAAGTGGACCATGGGATGCATTATTTGGTGGTGGTAACTTGCCGGCTTTTGTGGTGGGCGCCATAGCAGCTGCAGCCAGTGGCTTACTATCAATCTTCATGTTGCCGTCGCCACCACCAGACACGACCAAGGTGAAGACCATGGACGGAGGCTTTCATTAG 1569 0.5022 MDSKPTHFAKPPSLNDETTSVLEPSPFRKLVIVASIATGINFGWALQLSLLTPYVQLLGISHTMAPFIWLCGPISGLIVQPIVGYYSDRCKSRFGKRRPFIAAGALFVALAVFVISYTADLGHMFGDSLQEKSRPRAIAIFIIGFWILDVSNNVLQGPCRALLADLSAGDQRKTSMSNALFSFFMAVGKILGYAAGSYDGLHKIFPFTDTKACDKYCANLKSCFFISIALLACLATVALIYVKENIPSSSLATPENKGSGENSGDDSVEEGDGGLPCFGQMFGAFRDLKRPMWILLLVTCLNWIGWFPFVLFNTDWMGKEVYGGTVGEGNAYNNGVHAGALGLMIQSIVLGLVSLGVNVLARGVGGVKMLWGIVNFLLAICLALTVLITNMAEHTRHFPPNSTDPLPPVTSVKASALALFAVLGIPLAITYSVPFALASIFSNTSGAGQGLSLGVLNISICIPQMFVSFVSGPWDALFGGGNLPAFVVGAIAAAASGLLSIFMLPSPPPDTTKVKTMDGGFH 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0587 522 TIGRFAM GPH_sucrose: sucrose/H+ symporter 26 509 IPR005989 GO:0005887|GO:0008515|GO:0015770
Sto13g0587 522 Gene3D MFS general substrate transporter like domains 22 504 IPR036259 -
Sto13g0587 522 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 13 514 - -
Sto13g0587 522 MobiDBLite consensus disorder prediction 1 20 - -
Sto13g0587 522 MobiDBLite consensus disorder prediction 250 270 - -
Sto13g0587 522 Pfam MFS/sugar transport protein 42 259 - -
Sto13g0587 522 SUPERFAMILY MFS general substrate transporter 28 509 IPR036259 -
Sto13g0587 522 PANTHER SUGAR TRANSPORTER 13 514 - -
Sto13g0587 522 CDD MFS_SLC45_SUC 30 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0587 Sto-Chr13 5401349 5403706 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0587 23 522 Sucrose Transporter Gene Family AT1G71890 62.992 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0587 K15378 - gmx:547679 743.036