Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0579 ATGGCCCCTTTCATATGGCTATGCGGCCCAATCTCTGGCCTCATTGTTCAGCCCATTGTTGGTTACTACAGTGACCGTTGCAAATCCCGATTCGGCAAACGACGTCCGTTCATTGCTGTTGGTGCTCTTTTTGTTGCCTTGGCTGTTTTCGTGATCAGTTATGCCGCTGATCTCGGCCACATGTTTGGCGACTCATTGCAAGAGAAATCACGGCCTCGTGCCATTGCTATCTTCATCATCGGATTTTGGATCCTGGATGTCTCCAACAACGTGCTACAAGGTCCTTGTCGTGCTCTCCTTGCAGACCTGTCCGCCGGTGACCAGAGGAAGACGAGCATGTCGAATGCGCTTTTCTCGTTCTTCATGGCTGTCGGAAACATTCTTGTGGCATTGATCTACGTGAAGGAGAATATTCCATCGTCATCGCTAGCAACGCCAGAGAATAAAGGAAGTGGCGAGAACTCGGGCGATGATTCAGTGGAAGAGGGAGATGGGGGACTACCATGTTTTGGACAGATGTTCGGTGCATTCCGTGATCTTAAGAGGCCAATGTGGATTTTACTTCTGGTGACGTGTCTAAATTGGATTGGTTGGTTCCCTTTCGTGTTGTTCAACACTGATTGGATGGGGAAAGAGGTGTACGGAGGAACCGTTGGGGAAGGGAATGCGTACAATAATGGTGTGCATGCGGGAGCATTGGGTCTTATGATCCAATCAATTGTGCTGGGAGTGGTGTCGTTGGGAGTAAATGTGTTGGCGCGCGGGGTTGGGGGCGTGAAGATGCTATGGGGAATCGTTAACTTCTTGCTCGCGATCTGTTTGGCATTGACGGTGTTGATCACCAATATGGCAGAGCATACACGGCATTTCCCTCCGAACTCTACCGACCCTCTCCCACCTGTCACTAGCGTTAAGGCCAGTGCCTTAGCGCTTTTTGCTGTCCTTGGAATTCCTCTCGCGATTACTTACAGTGTCCCTTTTGCTCTCGCATCCATATTCTCCAACACTAGTGGGGCAGGCCAAGGATTATCTTTGGGAGTTCTCAATATCTCAATTTGCATACCACAGatgttCGTGTCTTTTGTAAGTGGACCATGGGACGCATTATTTGGTGGTGGCAACTTGCCGGCTTTTGTGGTGGGCGCCATAGCAGCTGCAGCCAGTGGCTTACTATCAATTTTCATGTTGCCGTCACCACCACCAGACACGACCAAGGTGAAGACCATGGACGGAGGCTTTCATTAG 1245 0.5004 MAPFIWLCGPISGLIVQPIVGYYSDRCKSRFGKRRPFIAVGALFVALAVFVISYAADLGHMFGDSLQEKSRPRAIAIFIIGFWILDVSNNVLQGPCRALLADLSAGDQRKTSMSNALFSFFMAVGNILVALIYVKENIPSSSLATPENKGSGENSGDDSVEEGDGGLPCFGQMFGAFRDLKRPMWILLLVTCLNWIGWFPFVLFNTDWMGKEVYGGTVGEGNAYNNGVHAGALGLMIQSIVLGVVSLGVNVLARGVGGVKMLWGIVNFLLAICLALTVLITNMAEHTRHFPPNSTDPLPPVTSVKASALALFAVLGIPLAITYSVPFALASIFSNTSGAGQGLSLGVLNISICIPQMFVSFVSGPWDALFGGGNLPAFVVGAIAAAASGLLSIFMLPSPPPDTTKVKTMDGGFH 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0579 414 MobiDBLite consensus disorder prediction 143 162 - -
Sto13g0579 414 SUPERFAMILY MFS general substrate transporter 5 401 IPR036259 -
Sto13g0579 414 PANTHER SUGAR TRANSPORTER 129 406 - -
Sto13g0579 414 PANTHER SUGAR TRANSPORTER 2 128 - -
Sto13g0579 414 CDD MFS_SLC45_SUC 4 394 - -
Sto13g0579 414 Gene3D MFS general substrate transporter like domains 181 410 IPR036259 -
Sto13g0579 414 Gene3D MFS general substrate transporter like domains 1 142 IPR036259 -
Sto13g0579 414 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 2 128 - -
Sto13g0579 414 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 129 406 - -
Sto13g0579 414 Pfam MFS/sugar transport protein 14 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0579 Sto-Chr13 5240543 5242699 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0579 4 414 Sucrose Transporter Gene Family AT1G71890 57.522 1.20e-167 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0579 K15378 - gmx:547679 580.096