Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0576 ATGGATTCTAAGCCTACCCATTTTGCCAAGCCTCCATCTCTCAACGATGAAACAACCTCCGTCCTTGAGCCCAGCCCTTTTCGAAAACTCGTCATCGTTGCTTCCATTGCCACCGGAATCAACTTCGGATGGGCTCTTCAGCTCTCCCTGTTGACTCCATATGTCCAGCTCCTCGGTATCTCCCACACCATGGCCCCTTTCATATGGCTATGCGGCCCAATCTCTGGCCTCATTGTTCAGCCCATTGTTGGTTACTACAGTGACCGTTGCAAATCCCGATTCGGCAAACGACGTCCGTTCATTGCTGCTAGTGCTCTTTTTGTTGCCTTGGCTGTTTTCGTGATCAGTTATGCCGCTGATCTCGGCCACATGTTTGGCGACTCATTGCAAGAGAAATCACGGCCTCGTGCCATTGCTATCTTCATCATCGGATTTTGGATCCTGGATGTCTCCAACAACGTGCTACAAGGTCCTTGTCGTGCTCTCCTTGCAGACCTGTCCGCCGCCGGATCGTACGACGGCCTCCACAAGATCTTCCCATTTACAGACACGAAAGCCTGTGACAAGTACTGCGCAAACCTCAAGAGCTGCTTCTTCATCTCCATTGCGTTACTAGCATGTCTTGCCACAGTGGCGCTGATCTACGTGAAGGAGAATATTCCATCGTCATCGCTAGCAACGCCAGAGAATAAAGGAAGTGGCGAGAACTCGGGCGATGATTCAGTGGAAGAGGGAGATGGGGGATTACCGTGTTTTGGACAGATGTTCGGTGCATTCCGTGATCTTAAGAGGCCAATGTGGATTTTACTTCTGGTGACGTGTCTCAATTGGATTGGTTGGTTCCCTTTTGTGTTGTTCAACACTGATTGGATGGGGAAAGAGGTGTACGGAGGAACAGTTGGGGAAGGGAATGCGTACAATAATGGTGTGCACGCGGGAGCATTGGGTCTTATGATCCAATCAATTGTGCTGGGAGTGGTGTCGTTGGGAGTAAATGTGTTGGCGCGCGGGGTTAGGGGCGTGAAGATGCTATGGGGAATCGTTAACTTCTTGCTCGCGATCTGTTTGGCATTGACGGTGTTGATCACCAATATGGCAGAGCATACACGGCATTTCCCTCCGAACTCTACCGACCCTCTCCCACCTGTCCTTGGAATTCCTCTCGCGATTACTTACAGTGTCCCTTTTGCTCTCGCATCCATATTCTCCAACACTAGTGGGGCAGGCCAAGGATTATCTTTGGGAGTTCTCAATATCTCAATTTGTATACCACAGatgttCGTGTCTTTTGTAAGTGGACCATGGGACGCATTATTTGGTGGTGGTAACTTGCCGGCTTTTGTGGTGGGCGCCATAGCAGCTGCAACCAGTGGCTTACTATCAATATTCATGTTGCCATCACCACCACCAGACACGACCAAGGTGAAGACCATGGACAGAGGCTTTCATTAG 1452 0.5007 MDSKPTHFAKPPSLNDETTSVLEPSPFRKLVIVASIATGINFGWALQLSLLTPYVQLLGISHTMAPFIWLCGPISGLIVQPIVGYYSDRCKSRFGKRRPFIAASALFVALAVFVISYAADLGHMFGDSLQEKSRPRAIAIFIIGFWILDVSNNVLQGPCRALLADLSAAGSYDGLHKIFPFTDTKACDKYCANLKSCFFISIALLACLATVALIYVKENIPSSSLATPENKGSGENSGDDSVEEGDGGLPCFGQMFGAFRDLKRPMWILLLVTCLNWIGWFPFVLFNTDWMGKEVYGGTVGEGNAYNNGVHAGALGLMIQSIVLGVVSLGVNVLARGVRGVKMLWGIVNFLLAICLALTVLITNMAEHTRHFPPNSTDPLPPVLGIPLAITYSVPFALASIFSNTSGAGQGLSLGVLNISICIPQMFVSFVSGPWDALFGGGNLPAFVVGAIAAATSGLLSIFMLPSPPPDTTKVKTMDRGFH 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0576 483 CDD MFS_SLC45_SUC 30 463 - -
Sto13g0576 483 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 168 475 - -
Sto13g0576 483 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 13 168 - -
Sto13g0576 483 MobiDBLite consensus disorder prediction 1 20 - -
Sto13g0576 483 MobiDBLite consensus disorder prediction 224 244 - -
Sto13g0576 483 Pfam MFS/sugar transport protein 42 167 - -
Sto13g0576 483 SUPERFAMILY MFS general substrate transporter 28 470 IPR036259 -
Sto13g0576 483 PANTHER SUGAR TRANSPORTER 13 168 - -
Sto13g0576 483 PANTHER SUGAR TRANSPORTER 168 475 - -
Sto13g0576 483 Gene3D MFS general substrate transporter like domains 27 173 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0576 Sto-Chr13 5208060 5210385 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0576 23 483 Sucrose Transporter Gene Family AT1G71890 58.566 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0576 K15378 - gmx:547679 671.389