Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0539 ATGCCTCTGAGGATGCTGTGGCTTGGGACCAAACTCATGATGGCTCCTTTACTGTACTTTCTTTGGAGGCTTGGGCATGAAAGTATTATGACCAACACTAATAGACTTAAAAGAGGTTTTACTTCCAATGACATTTGCCAACGTTATGGGGAGTTTCCGGAAACTGTCCTTCATGCCGTTAGGGACTGTAAATGGAATAAACCGGTTTGGGAGTTGTTGATTCACAGGTCTGCCAAGAATAGTTTCTTCAGCGGTAATCTGCGTGATTGGATTGAAGACAATCTGACGGCGCACAATGGTAGAAATAAGGGTCTTCCGTGGAGCACTACCTTTGCTATAGGGGCTTGGATGTGTTGGAAGCAACGAAATGatgaaattttcaataaaaagacTACAGATGTGAACTATCTTGTGCAGAGGATTCTGAATCAGGTGCTGATCTACATTAAAGCTGCTGAAACTCGCGATTTGGTTAATAATGTGCTTGATGAAAACTGTATGAACGGTACTAGTTGGCAAGCTCCTAGTAATGGTTGGAGCAAAGTGAACGTTGATGGATCGTGGAAGATGGACACGGATATTAGGCTTTTGACTCTCAGGAATTGGGATGTCAACATTAGGTATGTTCAAAGGTCTGGCAATATTGCTGCTGATTTGATGGCTAAGAATGGTCATAACCTCCCTTATGGTGCTAAAATGTATCCCAATCCCCTTGATATATGTATTAGTGCGTTTCATGCAAGAAAAACGTGTAACAACTGCTTCACTCCATTCGGTGGAGGACAGAGATTGTGCCCTGGGTTAGAACTCTCCAGACTTGAACTTCCTATTTTCCTTCACCATCTTGTCACTACTTACAGATGGGAAGCTGAGAAGGATGAGATAATCTACTTTCCAACGGTAAAGATAAGGAGGAAGCTGCCAATTAGAGTGAAacttattaattaa 948 0.4146 MPLRMLWLGTKLMMAPLLYFLWRLGHESIMTNTNRLKRGFTSNDICQRYGEFPETVLHAVRDCKWNKPVWELLIHRSAKNSFFSGNLRDWIEDNLTAHNGRNKGLPWSTTFAIGAWMCWKQRNDEIFNKKTTDVNYLVQRILNQVLIYIKAAETRDLVNNVLDENCMNGTSWQAPSNGWSKVNVDGSWKMDTDIRLLTLRNWDVNIRYVQRSGNIAADLMAKNGHNLPYGAKMYPNPLDICISAFHARKTCNNCFTPFGGGQRLCPGLELSRLELPIFLHHLVTTYRWEAEKDEIIYFPTVKIRRKLPIRVKLIN 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0539 315 PANTHER CYTOCHROME P450 26 243 311 - -
Sto13g0539 315 Pfam zinc-binding in reverse transcriptase 15 70 IPR026960 -
Sto13g0539 315 Pfam Cytochrome P450 232 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g0539 315 SUPERFAMILY Cytochrome P450 231 313 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g0539 315 Gene3D Cytochrome P450 231 313 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g0539 315 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 258 267 IPR017972 GO:0005506|GO:0016705
Sto13g0539 315 PANTHER CYTOCHROME P450 FAMILY BRASSINOSTEROID OXIDASE 243 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0539 Sto-Chr13 4802294 4804995 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0539 252 312 Cytochrome P450 AT5G05690 54.839 3.81e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0539 K12637 - cam:101510968 122.864