Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0520 ATGCTCCTTAAGTACAGGCCTGAGGATAAAGCTGAAAAGAAAGAGCGTCTTTTGAAAAGGGCTCAGGCAGAGGCAGAAGGAAAAACTGTTGAAGCAAAGAAGCCTATTGTTGTGAAATATGGTCTCAATCATGTTACCTACCTTATTGAGCAGATTGTACACAAGAAAACTGCATCAGTTTTGTGCTTGACAACTGTCAAGAATGAAGACAAACTAGAATTCTCGAAGATTCTAGAAGCTATCAAGGCCAACTTCAACGACAAGTATGATGAATACAGGAAGAAGTGGGGTGGTGGTATTATGGGTTCCAAGTCCCAAGCCAGAACCAAGGCCAAGGAGAGGCTCCTTGCCAAGGAAGCAGCTCAAAGGATGTCTTAA 378 0.4286 MLLKYRPEDKAEKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKYDEYRKKWGGGIMGSKSQARTKAKERLLAKEAAQRMS 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0520 125 PANTHER - 52 123 - -
Sto13g0520 125 PANTHER - 7 51 - -
Sto13g0520 125 Coils Coil 11 31 - -
Sto13g0520 125 Gene3D - 52 119 IPR029064 -
Sto13g0520 125 Gene3D - 1 51 IPR029064 -
Sto13g0520 125 SUPERFAMILY L30e-like 2 90 IPR029064 -
Sto13g0520 125 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 52 123 - -
Sto13g0520 125 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 7 51 - -
Sto13g0520 125 PRINTS Ribosomal protein L7A family signature 52 76 IPR001921 -
Sto13g0520 125 PRINTS Ribosomal protein L7A family signature 84 104 IPR001921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0520 Sto-Chr13 4627459 4628237 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0520 1 125 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 65.476 8.44e-70 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0520 K02936 - mnt:21394091 216.083