Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0502 ATGTTGTTCCCTTCCACTATTACTATTTCTTCTTATAACGATCCAATAATGGGGAGCTCTTATCATATTTATGGTAATAATCTTGAAGGTCAAAGCTCGAATGGTGGTCGTGATGGGATTATCGGTATGAATAATGGtattaatgatgataataataataataatagtgtgAGTTTGGATGTGAttaaggatgatgatgatgatgagaagaGAGGTGGTGGAtcaaggaagaagaaaggaggatTGAAGGTTAGAAAACCTAGGTATGCTTTCCAAACAAGGAGTCAAGTTGATATTCTTGATGATGGCTATAGATGGAGGAAATATGGTCAGAAAGCTGTTAAAAACAACAAATTCCCCAgGAGCTACTACAGATGTACTCATCAAGGTTGCAATGTGAAGAAGCAAGTGCAACGGCTAACGAAGGACGAGGGAGTAGTGGTGACAACGTATGAGGGAATTCACACACATCCAATAGACAAGACTACTGACAACTTTGAGAACATTTTGACTCAGATGCACATTTATAGTAATACCATTACTACTCCTCCCTATCCATTCCATTAA 567 0.3351 MLFPSTITISSYNDPIMGSSYHIYGNNLEGQSSNGGRDGIIGMNNGINDDNNNNNSVSLDVIKDDDDDEKRGGGSRKKKGGLKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGIHTHPIDKTTDNFENILTQMHIYSNTITTPPYPFH 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0502 188 MobiDBLite consensus disorder prediction 35 59 - -
Sto13g0502 188 MobiDBLite consensus disorder prediction 60 75 - -
Sto13g0502 188 Pfam WRKY DNA -binding domain 101 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g0502 188 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 65 176 IPR044810 GO:0003700
Sto13g0502 188 SUPERFAMILY WRKY DNA-binding domain 92 159 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto13g0502 188 Gene3D WRKY domain 85 159 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto13g0502 188 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 65 176 - -
Sto13g0502 188 SMART WRKY_cls 100 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g0502 188 ProSiteProfiles WRKY domain profile. 95 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g0502 188 MobiDBLite consensus disorder prediction 35 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0502 Sto-Chr13 4416582 4419331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0502 88 178 WRKY Transcription Factor Family AT5G13080 85.714 2.83e-56 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto13g0502 WRKY 2.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0502 - - pvu:PHAVU_001G088200g 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g0502 13 4416582 4419331 Sto13g0502 13 4416582 4419331 ECH