Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0452 ATGAGATACTTCCACCTCtattatcttcttcttccacttctttTCTTGTTCTTGTCTATCCCAAGACCTACCCATGAGCTTCAAGCTTCTCATACACAAGTCTTGTTACAATTAAGGAAGTATCTAGAGAATCCTACCTCTTTGGACATATTGGAATCTCACAATGGAGACTTGTGTGACATATCTCCTCCTTCTCCAAGTTTGAGCATCAAATGTGAGGACAATTCTGTGAGTGAGCTCAAGATTATGGGAGACAAACCTATTGTGACCATCAATATCAATGGCTTTGCAATTCCCAATAACCAAACACTCTCACATGGTTTCTCCATTGATTCCTTTGTCACCACACTCACTAGGATGTCTTCCAGCTTGAGGGTTCTCAGCTTGGTGTCCCTGGGGATGTGGGGCCCACTCCCTGATAAGATCCATAGGTTGTCCTCACTTGAGGTCTTGGATTTGAGCTCAAATTTCTTGTATGGTTCAATCCCACCAAGGATGTCCACTATGGTGAATCTTCAAACACTAGCACTCAATTCCAATTGCTTCAACACCACCATGCCTAATTGGTTTGGTAACTCATTGTCCAATCTCCATTCTTTGAGTTTGAACAACAATCACTTCAAGGGATCATTCCCTTCCTCACTTTGCAAGATCAAGACACTCATTGATGTCTCATTGTCCCACAATGACTTGTCTGGGAAACTGCCTGATCTCAGTGCTCTCACTGCCCTTCATGTCCTCAACCTGAGACGAAATCGCCTCGAATCCGAGCTGCCATCGATGCCCAAGGCAGTAATTACaattcttcttggtgaaaacttGTTCTCAGGGAAGATACCTGAGCAATTTGGTGAACTGGCAATGCTTCAACACGTGGACCTTTCGTCGAACCGGCTCGGCGGGGTCCCTCCGATTTCGGTGTTTTCTTTGCCTAACATCACCTACATGAATTTGGCAAGCAATGTTCTTAGTGGGTCACTTCCACACCAAATGGCTTGTGGGACTAAACTTGGGTATGTGGATGTTTCTGGTAATAAGTTAAGTGGTGAGCTTCCTTCTTGCTTGGCAAGTAATCTTGATACAAGAGTTGTGAAATATGGTGGGAATTGTTTGAGTGTTGGTCCTCAAGATTCTCAACATCAGAAGAAAGGGTCTTATTGTGAAGAACACAGCACAAAGAAGTTTAGGGCTTTGAAATTTGATGTGGTAATAGCAGCCATAGTTGTTGGACTTTGTCTCATACTTGTGGTTTTTGCCTTCGGAGTCTTCTTTCGTCGTAAAAGATGCCGGTTGAGAAAGGCGTCCAAGAAGGACTCGTTGCCGGCGAAGAGTGCTAGAGATAATTCCACAACTAATGGAGTTTCGTCCGAAATCCTTGCAAATGCCCGATTGATTTCTCAAGCTTTGAAACTTGGGACACAAGCTAATCCTTTCTGTAGAATGTTTTCAATTGAAGAGTTGAAGGAAGCCACAAAATATTTTGACATGTCAACTTACATAGGTGAAGGCTCCATAGGGAAGatgtATAAAGGTAAATTGGACAATGGGTCCTATGTGGCAATAAGATCTTTGGCTCTTTCAAAGAAATGCTCAATTCAAAATCTTAAAGGTCGCTTGGATTTACTCTCAAAGCTTCATCATCCAAATTTGGTTAGCTTCTTAGGTCATTGTATTGATGATGGAGGACAAGATGATTCTAGTATCCTCAAACTTCATCTTGTATATGAGTACGTGCCAAATGGAAGTTATCTTGATCGTCTCTCAGAATTTTCTCCAGAGAAGGCACTAAAATGGTCTGATAGATTGAGCATTTTAATTGGAATAGCTAAGGCTGTGCATTTTTTACATACTGGGGTTATACCTTCCTGTTTTAATAACCAACTAAAGGCCAGCAATATTCTACTTGATGAGCATAACTTTCCCAAACTAAGTGACTATGGGATGTCCATCATCAAAGAAGAGGTTGAAAAGTTTGAgGCAAAGGGAGAAGACCCATTATTATGCCTGAGAACAACATTGGAGGATGACGTTTATAATTTTGGATTCATATTGTTTGAATCGCTTGTTGGAACCATTGGAAGTGAGAAAAGAGAACAAGTTTTCTTAAATGAAAAGGCATCGTTTGGGAGTCAAGATGGCAGAAGAAAAATTGTGGATCCCATAGTCTTAACCACTTGCTCTCAAGAATCATTATCAATTGCAATATCCATAACTACCAAATGCATATCCCCAGAACCTTCCTCTCGTCCCTCTTTTGAGGATGTGCTTTGGAATTTGCAGTATGCAGCTCAAGTCCAGGCCACTTCTGATACAGATCAAAAATCAGATTGA 2331 0.4067 MRYFHLYYLLLPLLFLFLSIPRPTHELQASHTQVLLQLRKYLENPTSLDILESHNGDLCDISPPSPSLSIKCEDNSVSELKIMGDKPIVTININGFAIPNNQTLSHGFSIDSFVTTLTRMSSSLRVLSLVSLGMWGPLPDKIHRLSSLEVLDLSSNFLYGSIPPRMSTMVNLQTLALNSNCFNTTMPNWFGNSLSNLHSLSLNNNHFKGSFPSSLCKIKTLIDVSLSHNDLSGKLPDLSALTALHVLNLRRNRLESELPSMPKAVITILLGENLFSGKIPEQFGELAMLQHVDLSSNRLGGVPPISVFSLPNITYMNLASNVLSGSLPHQMACGTKLGYVDVSGNKLSGELPSCLASNLDTRVVKYGGNCLSVGPQDSQHQKKGSYCEEHSTKKFRALKFDVVIAAIVVGLCLILVVFAFGVFFRRKRCRLRKASKKDSLPAKSARDNSTTNGVSSEILANARLISQALKLGTQANPFCRMFSIEELKEATKYFDMSTYIGEGSIGKMYKGKLDNGSYVAIRSLALSKKCSIQNLKGRLDLLSKLHHPNLVSFLGHCIDDGGQDDSSILKLHLVYEYVPNGSYLDRLSEFSPEKALKWSDRLSILIGIAKAVHFLHTGVIPSCFNNQLKASNILLDEHNFPKLSDYGMSIIKEEVEKFEAKGEDPLLCLRTTLEDDVYNFGFILFESLVGTIGSEKREQVFLNEKASFGSQDGRRKIVDPIVLTTCSQESLSIAISITTKCISPEPSSRPSFEDVLWNLQYAAQVQATSDTDQKSD 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0452 776 Gene3D Ribonuclease Inhibitor 28 264 IPR032675 -
Sto13g0452 776 PANTHER OS07G0166700 PROTEIN 12 776 IPR045272 GO:0004714|GO:0006468
Sto13g0452 776 Pfam Leucine rich repeat 289 347 IPR001611 GO:0005515
Sto13g0452 776 CDD TM_EGFR-like 404 433 - -
Sto13g0452 776 SUPERFAMILY Protein kinase-like (PK-like) 476 759 IPR011009 -
Sto13g0452 776 Gene3D Transferase(Phosphotransferase) domain 1 578 776 - -
Sto13g0452 776 SMART LRR_typ_2 169 192 IPR003591 -
Sto13g0452 776 SMART LRR_typ_2 241 264 IPR003591 -
Sto13g0452 776 SMART LRR_typ_2 194 218 IPR003591 -
Sto13g0452 776 SMART LRR_typ_2 145 168 IPR003591 -
Sto13g0452 776 SMART LRR_typ_2 286 310 IPR003591 -
Sto13g0452 776 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 12 776 - -
Sto13g0452 776 ProSiteProfiles Protein kinase domain profile. 494 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g0452 776 Pfam Protein tyrosine and serine/threonine kinase 496 757 IPR001245 GO:0004672|GO:0006468
Sto13g0452 776 Gene3D Phosphorylase Kinase; domain 1 456 577 - -
Sto13g0452 776 Gene3D Ribonuclease Inhibitor 265 395 IPR032675 -
Sto13g0452 776 SUPERFAMILY L domain-like 112 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0452 Sto-Chr13 3916535 3924265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0452 10 707 Miscellaneous Gene Families AT5G14210 53.966 0.0 685
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Sto13g0452 PK_Tyr_Ser-Thr 2.6e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0452 - - gmx:100813412 996.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g0452 13 3916535 3924265 Sto13g0452 13 3916535 3924265 ECH
Sto8g1729 8 11019884 11023441 Sto13g0452 13 3916535 3924265 ECH