Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0376 ATGGGATCTGGGAATGAGGTTCATTCAGTAGATGAGTTTAATTTGGATGCCAAGTGGCTGATAGATCCCAAGCAACTATTTGTTGGGCCAAAAATTGGAGAAGGTGCACATGCCAAAGTGTACGAAGGAAAATATAGGAATCAAAATGTTGCTGTGAAGATTATCAATAAGGGAGAAACCCCAGAAGAGATTTCAAGGAGAGAGGCTCGGTTTGCGAGAGAAGTTGCAATGTTATCCAGAGTTCAACACAAAAATCTGGTTAAGTTTATTGGCGCCTGCAAAGAACCTGTTATGGTTATAGTGACTGAGCTTTTATCGGGTGGAACTTTGCGCAAATTTCTCTTGAATATGCGGCCAAACTGCTTGGACATGCATGTAGCAGTTGGATTTGCTCTTGATATTGCTCGAGCAATGGAATGTTTACATTCCCATGGGATCATTCACCGTGATCTTAAACCCGAGAACTTGATTTTGACAGCGGATCATAAAACAGTTAAACTTGCTGATTTCGGTTTAGCAAGAGAAGAGTCATTAACAGAGATGATGACAGCTGAGACGGGGACGTACCGCTGGATGGCTCCTGAACTTTACAGCACTGTCACTCTAAGACAAGGTGAGAAGAAGCATTACAATCATAAGGTGGATGCCTACAGCTTTGCAATTGTGTTATGGGAACTCATCCATAACAAGTTACCCTTTGAAGGCATGTCTAATCTACAGGCAGCATATGCAGCTGCTTTTAAGAATGTAAGGCCCAGTGCTGAAAATCTTCCTGAGGATTTAGCCCTAATTGTGACTTCATGTTGGAAAGAGGACCCGAACGATCGACCCAATTTCAGTCAAATCATACATATGCTTCTTCGATATCTCTCCACTATTTCGCCGCCGCAACCTATTTTTCTTCAGCGTATTGCTTCATCTGAAAATGCTGTGTTGCCACCGGAGTCACCCGGCACAAGTGCTTTGATGGCCAGAAGAGATGATTCCGAAGCAACCCCAACTGCCGCCGACATGGAAGACAAGCCTAAAGGTTTCTTCTTCTGCTTTAACCAGTGCTTCTGA 1062 0.435 MGSGNEVHSVDEFNLDAKWLIDPKQLFVGPKIGEGAHAKVYEGKYRNQNVAVKIINKGETPEEISRREARFAREVAMLSRVQHKNLVKFIGACKEPVMVIVTELLSGGTLRKFLLNMRPNCLDMHVAVGFALDIARAMECLHSHGIIHRDLKPENLILTADHKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELIHNKLPFEGMSNLQAAYAAAFKNVRPSAENLPEDLALIVTSCWKEDPNDRPNFSQIIHMLLRYLSTISPPQPIFLQRIASSENAVLPPESPGTSALMARRDDSEATPTAADMEDKPKGFFFCFNQCF 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0376 353 PANTHER PROTEIN KINASE ATN1 1 329 - -
Sto13g0376 353 Pfam Protein tyrosine and serine/threonine kinase 29 286 IPR001245 GO:0004672|GO:0006468
Sto13g0376 353 SMART serkin_6 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g0376 353 Gene3D Phosphorylase Kinase; domain 1 14 105 - -
Sto13g0376 353 MobiDBLite consensus disorder prediction 313 336 - -
Sto13g0376 353 SUPERFAMILY Protein kinase-like (PK-like) 18 309 IPR011009 -
Sto13g0376 353 CDD STKc_MAP3K-like 32 286 - -
Sto13g0376 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Sto13g0376 353 ProSiteProfiles Protein kinase domain profile. 26 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g0376 353 PRINTS Tyrosine kinase catalytic domain signature 102 115 IPR001245 GO:0004672|GO:0006468
Sto13g0376 353 PRINTS Tyrosine kinase catalytic domain signature 140 158 IPR001245 GO:0004672|GO:0006468
Sto13g0376 353 PRINTS Tyrosine kinase catalytic domain signature 214 236 IPR001245 GO:0004672|GO:0006468
Sto13g0376 353 PRINTS Tyrosine kinase catalytic domain signature 257 279 IPR001245 GO:0004672|GO:0006468
Sto13g0376 353 PIRSF TyrPK_CSF1-R 115 341 - -
Sto13g0376 353 PIRSF TyrPK_CSF1-R 2 128 - -
Sto13g0376 353 Gene3D Transferase(Phosphotransferase) domain 1 106 308 - -
Sto13g0376 353 PANTHER SERINE-THREONINE PROTEIN KINASE 1 329 - -
Sto13g0376 353 ProSitePatterns Protein kinases ATP-binding region signature. 32 53 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0376 Sto-Chr13 3299920 3303674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0376 9 353 MAP Kinase Kinase Kinase AT5G50180 78.551 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Sto13g0376 PK_Tyr_Ser-Thr 1.2e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0376 - - mnt:21403469 642.114