Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0304 ATGTATAGAATACTATCCACGCCGGCCCATAAATTCCGCCATTTTGGGCGACTCCACCCCCCCAAGCCCACCGGCGCCACCACCGACGAGGAACACGCCCACCACATCCTATGGCATTACCAAATCCTCGACCCCGACAGCGACCTCGTAGCCCACTGGAACAGGGTCTTCCTCGTCACCAGTCTTATCGCGCTTTTCATCGATCCTCTTTACTTGTACCTTCCCTACATCGGAGGCCCCGGTTGCTTGCAAACGGATCGGGAGTTGAACATCATCGTCACCATCCTTCGCACCTTCTCCGATCTCTTCTACGTGCTCCACATGGCCATGAAATTTCGCACCGCCTTTGTTGCCCCAAATTCTAGGGTTTTCGGGAGGGGTGAATTGGTCATGGATGCCCGAGAAATTGCTATGCGCTACTTGAGGACGGATTTCGTTGTTGATCTCGCCGCAACACTTCCTGTGCCCCAAATTGTGATATGGTTAGTGATTCCAGCGACGAAAAACTTAGCTGAACGTGCGCACGTCACTCTTGCTCTTTTCGTTCTTATTCAGTATGTTCCTAGATGGTTTCTCATCTTCCCTTTGAACAAGCGCATTGTGAAAACCTCTGGCGTTGTTGCTAAGACTCCCTGGACTGGAGCTGCATACAATCTTCTACTCTACTTGCTAGCTAGTCATGTTGTAGGAGCAACTTGGTATCTATCCTCAATATCTCGACAATTGAAATGCTGGAACACGGAGTGCGATGAAGAGAACAAATCACAAGCCCTGTCTTGCCTTGCTAGTTATCTTGATTGTCGGACTTTGGGCAACCCTGATAGGGATTACTGGCTTAATGTCACCAGTGTTGTTAACAGTTGTGATGTAAAGAGTGGAAACAACAAATATACATTTGGGATGTTTGCAGCTGCTTTCACCAAGGAAGTTGCTTCTGGCAAATTCAAGGAGAGATACTTCTACTGTCTTTGGTGGGGTTTAAGAAATTTAAGCTCATTTGGACAGAATTTAGACACTACCGTATTTATTGGGGAAACAACTTTTTCCATCGTCCTATGCATAGTTGGATTAGTTCTCTTTGCACTTCTGATTGGAAACATGCAGACATATTTAGAATCAATGTCAGCAAGACTTGAAGAATGGAGGGTTAGGAAAAGAGACACTGAGGAGTGGATGAGGCATCGCCAGTTACCTCCAGAGTTGCAGGAACGCGTCCGTCGCTTTGTTCAATATAAATGGCTTGCAACAAGAGGAGTTGATGAAGAATCCATATTGCTTTCACTACCTTTGGATCTGCGTCGTGAAATTCAACGTCACTTGTGTCTTGCTCTTGTTCGGCGTGTACCCTTCTTCTCACAGATGGACGATCAACTCCTTGATGCCATTTGCGAACGCCTTGTCTCGTCCTTAAATACTGAAGGCACCTACATTTTTCGGGAGGGTGATCCGGTGAATGAAATGGTGTTCATAATCAGAGGGCAACTGGAGAGCTCCACAACCAATGGGGGAAGGTCAGGGTTCTTCAATTCCATTACCCTCAGACCTGGAGACTTTTGTGGTGAGGAATTACTGACATGGGCCTTAATGCCAAACTCTAGCTCGAACCTTCCTTCTTCGACTCGATCCGTTAAAGCTCTCACCGAAGTCGAAGCCTTCGCGCTACAGGCAGAGGATCTCAAGATTGTGGCAGGTCAGTTCAAGCGCCTTCACAGTAAGAAACTCCAGCATGCCTTTAGATATTATTCCCATCAATGGAGAACTTGGGCTGCTTGCTTCATAGAAGCTGCTTGGAGAAGGTATAAGAAACGTAAGGCACTTAGGGAGTTGTCCTTGAACGAGAGCCTTTACTACTATAATATGGCAAGTACTAGTTACAACAGCAGCAGTGACGTCATGCTTGCAGCAAATAGAAACTACCAAGATGATGAGAAGATGAAGGAGTCATTGAAGGATGATTCTGGAAATGGCGAACATTCTCTTGGTGTTACTGTTTTGGCCTCGAAGTTTGCTTCCAATGCAAGGAAAGGGACGAACACTACTAGCCAGAAAGTTCAAGGCAGTAGTAGTAGTGATCCTGTTCCACAATTGTTCAAGCCAGATGAACCTGATTTCTCTGTACCATGA 2124 0.4642 MYRILSTPAHKFRHFGRLHPPKPTGATTDEEHAHHILWHYQILDPDSDLVAHWNRVFLVTSLIALFIDPLYLYLPYIGGPGCLQTDRELNIIVTILRTFSDLFYVLHMAMKFRTAFVAPNSRVFGRGELVMDAREIAMRYLRTDFVVDLAATLPVPQIVIWLVIPATKNLAERAHVTLALFVLIQYVPRWFLIFPLNKRIVKTSGVVAKTPWTGAAYNLLLYLLASHVVGATWYLSSISRQLKCWNTECDEENKSQALSCLASYLDCRTLGNPDRDYWLNVTSVVNSCDVKSGNNKYTFGMFAAAFTKEVASGKFKERYFYCLWWGLRNLSSFGQNLDTTVFIGETTFSIVLCIVGLVLFALLIGNMQTYLESMSARLEEWRVRKRDTEEWMRHRQLPPELQERVRRFVQYKWLATRGVDEESILLSLPLDLRREIQRHLCLALVRRVPFFSQMDDQLLDAICERLVSSLNTEGTYIFREGDPVNEMVFIIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALMPNSSSNLPSSTRSVKALTEVEAFALQAEDLKIVAGQFKRLHSKKLQHAFRYYSHQWRTWAACFIEAAWRRYKKRKALRELSLNESLYYYNMASTSYNSSSDVMLAANRNYQDDEKMKESLKDDSGNGEHSLGVTVLASKFASNARKGTNTTSQKVQGSSSSDPVPQLFKPDEPDFSVP 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0304 707 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 30 706 - -
Sto13g0304 707 Coils Coil 632 652 - -
Sto13g0304 707 ProSiteProfiles cAMP/cGMP binding motif profile. 450 580 IPR000595 -
Sto13g0304 707 Gene3D Helix hairpin bin 374 441 - -
Sto13g0304 707 Pfam Cyclic nucleotide-binding domain 473 560 IPR000595 -
Sto13g0304 707 Pfam Ion transport protein 53 377 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sto13g0304 707 SUPERFAMILY cAMP-binding domain-like 379 575 IPR018490 -
Sto13g0304 707 MobiDBLite consensus disorder prediction 673 707 - -
Sto13g0304 707 SMART cnmp_10 450 581 IPR000595 -
Sto13g0304 707 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 18 30 706 - -
Sto13g0304 707 Gene3D Jelly Rolls 448 568 IPR014710 -
Sto13g0304 707 SUPERFAMILY Voltage-gated potassium channels 44 372 - -
Sto13g0304 707 CDD CAP_ED 450 581 IPR000595 -
Sto13g0304 707 Gene3D - 57 373 - -
Sto13g0304 707 MobiDBLite consensus disorder prediction 673 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0304 Sto-Chr13 2702008 2707456 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0304 10 706 Ion Channels AT5G14870 65.638 0.0 982
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0304 K05391 - gmx:100802812 1045.03