Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0284 ATGTTCACTCTGCAGTTCACCGCCACCGCCGGAGCTACGACGGATCGTCCTTCGCCGTTTCTGCTAGGGAGCAGCGACTCGTGTTGTTCGTTTCGGTCCGCGAATCGGTGCTTGCTCAAACCAAGTTCTCTAGATACTGGtagagaggagaagaagaagaagaagaagcttcgATTCAATGGTGGAACTGTTAGGGTTTCCGCAATGTCTGGTAATGGTCATTCTCCCGCGTTCAAGATGAATCTCAACGAGTATCTGGTCACTTTGGAGAAGCCGCTTGGTATACGGTTCGCTCTCACTGTCGACGGGAAGATCATCGTTCACTCGCTTAAGAAAGGGgGTAATGCGGAGAAGTCTAGAATCATCATGGTTGGTGACACTTTAAAGAAAGCTGGCGATTCATCTCAAGATAGGCTTGTTCAGATTAAAGACGTTGGAGATGCACAGAACGTTCTGAAGGAGCAAAGACATTCTTTTAGCTTGGTTTTTGAGAGACCCACATCTCCTTTTCCCATTCAACTACTGCATAGGATGAATgattttgaaatattatttaatcgaGGACAAGCACCTATTGCCACCTGGAACAAGACACTCTTGGCATCAAATTTACAGCCATCTATCGAGAGCTCTGGGAATTGTGGGTTTTTGGTCTACAACTCAAAGTTTCTAACACCAAAAGGATGCAAGTTATTGGGCAATCCAAATGAACATGTCATCCTCCATGAGGATATAAAATTCTTTACTGAAGAAGACTATGAAGAAGGAGAATGGGCTCATGGAAGTTTCCCTCTTGAGGAATATATTAAAGCTCTGGATCGTTCAAAAGGTGAAATGTACTATGATCATTCAATTGGTATGCGCTATACTAAGATATCGGAGCAAATATATGTTGGATCCTGTATACAAACTGAAGCTGATGTGGAAACCTTGTCAAAAGTTGAGGGAGTCACTGCTGTTCTGAACTTCCAAAGTGCAGCTGAAGCTGAGAATTGGGGAATTGATTTAAAATCCATTACTGAATTATGTCAAAGGAACAATATCCTCATGATCAACTATTCTATACGGGAGGGAGATTCTTATGATATGAGGAAGAAATTACCATTTTGTGTGGGGCTTATGTTACGGTTGCTGAGGAAAAATCATCGTGTTTTTGTTACTTGTACTTCTGGATTTGATCGGTCTCCTGCTTGTGTAATTGCATACCTGCATTGGATGACAGATATTTCCCTTCATGCAGCTTATACTTGGGTTACTGGGATGTACACGTGCAGGCCTGACAGGCCGGCAATTGCATGGGCCACGTGGGATCTTATAGCTATGGTTGAAAAAGGTAACCATGAGGGACCTCCAACACATGCTGTCACATTTGTGTGGAATGAGAGTGAGGGACAGGATGTGAATTTGGTTGGAGATTTTACTGGAAATTGGAAAGAACCAATAAAGGCAATATACAAGGGTGGAGTAAGATACGAAGTAGAAGTTAAACTTCCACAAGGAAAGTACTACTACAAGTTTATCGTTAATGGACAATGGAGGCATTCAACTTCTTCACCCTCAGAAAGGGATGAAAGGGGGAATGTTAACAACGTTATTGTGATTGGTGATACTGCCAACGTTAGGCCTTCTATCCAACACCAGCAGAAAGATGCCAACATTGTGAAGGTGATCGAGAGGCCTTTGGACGAAAAGGAACGGTTTAAGCTGGCAAAAGCAGCTCGCTGTATTGCTTTCTATGTGTGTCCGATCACATTAGCTCCCAAATCCCAAGTAGTTGCATAG 1782 0.4192 MFTLQFTATAGATTDRPSPFLLGSSDSCCSFRSANRCLLKPSSLDTGREEKKKKKKLRFNGGTVRVSAMSGNGHSPAFKMNLNEYLVTLEKPLGIRFALTVDGKIIVHSLKKGGNAEKSRIIMVGDTLKKAGDSSQDRLVQIKDVGDAQNVLKEQRHSFSLVFERPTSPFPIQLLHRMNDFEILFNRGQAPIATWNKTLLASNLQPSIESSGNCGFLVYNSKFLTPKGCKLLGNPNEHVILHEDIKFFTEEDYEEGEWAHGSFPLEEYIKALDRSKGEMYYDHSIGMRYTKISEQIYVGSCIQTEADVETLSKVEGVTAVLNFQSAAEAENWGIDLKSITELCQRNNILMINYSIREGDSYDMRKKLPFCVGLMLRLLRKNHRVFVTCTSGFDRSPACVIAYLHWMTDISLHAAYTWVTGMYTCRPDRPAIAWATWDLIAMVEKGNHEGPPTHAVTFVWNESEGQDVNLVGDFTGNWKEPIKAIYKGGVRYEVEVKLPQGKYYYKFIVNGQWRHSTSSPSERDERGNVNNVIVIGDTANVRPSIQHQQKDANIVKVIERPLDEKERFKLAKAARCIAFYVCPITLAPKSQVVA 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0284 593 Gene3D Immunoglobulins 442 538 IPR013783 -
Sto13g0284 593 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 281 420 IPR029021 -
Sto13g0284 593 Pfam Glycogen recognition site of AMP-activated protein kinase 455 536 IPR032640 -
Sto13g0284 593 CDD E_set_AMPKbeta_like_N 455 534 - -
Sto13g0284 593 CDD DSP_laforin-like 287 433 IPR045204 GO:0019203|GO:0046838
Sto13g0284 593 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 52 588 IPR030066 GO:0005983
Sto13g0284 593 SUPERFAMILY E set domains 452 535 IPR014756 -
Sto13g0284 593 SUPERFAMILY PDZ domain-like 90 178 IPR036034 GO:0005515
Sto13g0284 593 Gene3D Protein tyrosine phosphatase superfamily 281 547 IPR029021 -
Sto13g0284 593 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 52 588 - -
Sto13g0284 593 ProSiteProfiles PDZ domain profile. 86 167 IPR001478 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0284 151 589 Protein tyrosine phosphatase (PTP) family AT3G01510 65.556 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0284 - - gmx:100814503 885.945