Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0283 ATGCCTCGAAGACCTAAGAGGAGGATACGTTTTAGCAAACTGTATTCGTTTTCCTGCATAAAATCTTCGTTCAGACATGATCATTCTCAAATAGGGCAGAGAGGGTACTCGAGGATTGTGTACTGTAATGAGCCTGATATTCCGGAAGCTGCTCAGTTGAGTTACAGGGGGAATTATGTTTCGACCACTAAGTATACGGCTTTTAATTTCATTCCCAAGTCTTTGTTTGAGCAGTTTAGGAGGGTTGCAAATATCTACTTTCTCATTGTGGCCTGTCTTTCGTTTAGTCCGTTGGCACCTTTCACAGCTCTTAGTATTGTTGCGCCCTTGTTAGTTGTGATAGGAGCTACTATGGCCAAGGAGGCTGTGGAAGATTGGAGGAGGAGGAAACAGGATATAGAGGCAAACAATCGAAAAGTTAATGTGTACAGTAGAAATTATACATTTGTGGAGACCAGATGGAAGAATCTTCGTGTGGGTGATCTCATTAAAGTGTATAAGGATGAATACTTTCCTGCTGATCTTCTTTTGCTTTCATCGAGTTATGATGATGGAGTTTGCTATGTTGAGACAATGAATCTAGATGGAGAAACTAATCTAAAATTAAAGCATGCTTTGGAGGTGACTGCTAATCTTCAAGATGAAAAATCCCTTCAAAAGTTCAGGGCAGTTGTCAAATGTGAGGATCCTAATGAAAATCTGTACTCATTTGTTGGAACTTTGCACTACGAAGGTAAGGAGTATCCGCTTTCCTTACAGCAGATTCTTTTAAGAGATTCTAAGCTGAAAAACACGGAATATATCTGTGGTGTTGTTATCTTTACTGGACATGATACAAAAGTGATGCAGAATGCCACTGACCCACCATCCAAAAGAAGcaaaattgagagaaaaatggataaaattatttacatcCTCTTCAGTACCTTGGTTCTTATTTCCTTTATTGGTTCAGTCTATTTTGGTATCGAGACCAAAAGGGATATAAGTGATGGCGAGTACAGAAGATGGTATCTTCGTCCAGACAATACAACAGTGTTTTATGATCCTAGAAATGCAACAATTGCtgctcttcttcattttttaactGCCCTTATGTTGTATGGATATTTAATTCCAATATCGCTGTATGTCTCCATAGAAATTGTGAAAGTGTTGCAGTGTATTTTCATCAACCAAGATCAGGGAATGTATTATGAAGAAACAGATAAGCCAGCTCATGCACGCACATCGAATTTGAATGAAGAACTTGGTCAGGTTGATACTATATTGTCTGACAAAACAGGTACATTGACTTGTAACTCTATGGAGTTTGTGAAATGTTCCATAGCCGGCACAGCATATGGTCGTGGTATGACAGAAGTGGAGAGGGCCCTTGCAAGGAGAAGGGGAAATGGGGAATCGGAAGCCGATGGTTTATCGTCTGATTTACAGGGTCAGCAAAGTGATGAAGTTGAGTACAGGCAGCCAATTAAGGGTTTCAACTTTAGAGACGAACGTATAATGAATGGGAATTGGGTCAATGAACCTCATTCAGacatcatacaaaaattctttCGAGTTTTAGCTATTTGCCATACAGCCATTCCTGATGTGGATGAAGATTCTGGAGATATTACCTATGAAGCCGAGTCTCCAGATGAAGCGGCTTTTGTCATAGCTGCGAGGGAACTTGGTTTTGAGCTTTTTTCAAGAACACAAACAACCATATCGTTGGATGAACTAGATTACAACAGTGGAAAAAAGGTTGACAGAGTGTACGAGCTTCTGCATGTCTTAGAGTTCAGCAGTTCCCGCAAAAGAATGTCAGTGATTGTAAGGAATGAAGAAAATCAGCTATTGCTCCTATGCAAGGGTGCAGACAGTGTTATGTTTGAAAGGCTCTCCCAAGATGGAACACAATTTGAGGCCGAGACCATGGATCATATCAAAAGATACTCTGAGGCAGGTTTAAGAACTCTGGTAGTTGCATACCGTGAACTTGATGAAGAAGAATATCGGTTGTGGGAGGAGGAGTTCTTAAAGGCCAAAACTTCTGTAGATGCAGACCGTGATGTATTGGTGGAAGCAGCTGCTGATAAGATGGAAAGAGATTTGATTCTTCTTGGTGCGACAGCAGTTGAGGATAGACTGCAGAAGGGGGTACCTGAATGTATTGATAAGCTTGCCCAGGCAGGGATAAAATTATGGGTATTAACTGGGGACAAGATGGAAACTGCAGTAAACATAGGGTATGCTTGTAGTTTACTTCGGCAAGACATGAAACAGATAGTGATAACTCTTGATTCACCCGATATTCTATCCTTGGAAAAACAAGGGGATAAAGAGGCAGTAGCAAAGGCCTCTCTTGAAAGCATTAAGAAACAAATCAAAGAGGGAATTGCACAAATCAAATCTGCAAAACAAAGTTCTGATACAGCTAGAGAAAGTTCTACTGAATTTGGGTTGATAATCGATGGGAAGTCCTTGGATTATTCTCTGCACAAGAATTTGGAGAGGTCATTCTTTGAGCTGGCAATTAATTGTGCTTCAGTAATATGTTGCCGATCCTCACCCAAACAAAAAGCTCGAGTTACAAGATTGGTGAAATTGGGAACAGGGAAGACAACACTATCTATTGGTGATGGAGCAAATGACGTTGGCATGCTTCAAGAAGCTGATATTGGAGTCGGTATTAGTGGTGCTGAAGGGATGCAGGCTGTGATGGCAAGTGATTATGCAGTAGCTCAGTTTTGTTTTCTGGAGCGTTTGTTGTTGGTACATGGCCACTGGTGTTATAGGCGAATTGCAATGATGatatgctattttttctacaagaACATCGCATTTGGATTTACGCTTTTTTGGTTTGAGGCATATGCTTCTTTCTCCGGTCAACCTGCATACAATGATTGGTACATGTCATTTTACAATGTCTTCTTCACTTCGCTTCCTGTCATTGCTCTCGGTGTTTTTGATCAAGACGTTTCTGCCCAACTTTGCCTCAAGTATCCCTTTCTATATCTAGAGGGAATAGAAGACATCCTCTTCAGCTGGCCTCGGATTCTCGGCTGGATGTTCAACGGCGTCATCAGTTCCTTGATTATCTTCTTCCTGACCACCAACTCGGTCCTAAACCAGGCCTTCAGAAGAGACGGTCAGATGGTCGATTTGGAAGTGTTAGGAGTCACAATGTACACTTGTGTGGTTTGGACTGTGAATTGCCAGATGGCATTATCTGTGAACTACTTCACTTGGATCCAACACTTCTTCATATGGGGAAGCATTGCCTTCTGGTATGTGTTCTTGCTGGTTTATGGCTATCTCTCTCCAGCCATATCCACAACAGCCTACAAGGTCCTCACTGAAGCTTGTGCTCCCAGTGGTCTGTATTGGCTAGTGACCCTTTTGGTGGTTGTGTGTGCCCTTCTGCCCTATTTCTCCTATAGGGCTTTCCAGACTCGGTTCCGGCCGATGTACCACGATATTGTTCAGAAAAAgtaTGATAATGATGAAAGTGAGATGTCTCAAGAAGTGTTGCCTAATAGAGTCAAGGGGAAATTGACCCATCTGAGGAAaaaattgaagcagagggagttgTGA 3582 0.4059 MPRRPKRRIRFSKLYSFSCIKSSFRHDHSQIGQRGYSRIVYCNEPDIPEAAQLSYRGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFLIVACLSFSPLAPFTALSIVAPLLVVIGATMAKEAVEDWRRRKQDIEANNRKVNVYSRNYTFVETRWKNLRVGDLIKVYKDEYFPADLLLLSSSYDDGVCYVETMNLDGETNLKLKHALEVTANLQDEKSLQKFRAVVKCEDPNENLYSFVGTLHYEGKEYPLSLQQILLRDSKLKNTEYICGVVIFTGHDTKVMQNATDPPSKRSKIERKMDKIIYILFSTLVLISFIGSVYFGIETKRDISDGEYRRWYLRPDNTTVFYDPRNATIAALLHFLTALMLYGYLIPISLYVSIEIVKVLQCIFINQDQGMYYEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIAGTAYGRGMTEVERALARRRGNGESEADGLSSDLQGQQSDEVEYRQPIKGFNFRDERIMNGNWVNEPHSDIIQKFFRVLAICHTAIPDVDEDSGDITYEAESPDEAAFVIAARELGFELFSRTQTTISLDELDYNSGKKVDRVYELLHVLEFSSSRKRMSVIVRNEENQLLLLCKGADSVMFERLSQDGTQFEAETMDHIKRYSEAGLRTLVVAYRELDEEEYRLWEEEFLKAKTSVDADRDVLVEAAADKMERDLILLGATAVEDRLQKGVPECIDKLAQAGIKLWVLTGDKMETAVNIGYACSLLRQDMKQIVITLDSPDILSLEKQGDKEAVAKASLESIKKQIKEGIAQIKSAKQSSDTARESSTEFGLIIDGKSLDYSLHKNLERSFFELAINCASVICCRSSPKQKARVTRLVKLGTGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDYAVAQFCFLERLLLVHGHWCYRRIAMMICYFFYKNIAFGFTLFWFEAYASFSGQPAYNDWYMSFYNVFFTSLPVIALGVFDQDVSAQLCLKYPFLYLEGIEDILFSWPRILGWMFNGVISSLIIFFLTTNSVLNQAFRRDGQMVDLEVLGVTMYTCVVWTVNCQMALSVNYFTWIQHFFIWGSIAFWYVFLLVYGYLSPAISTTAYKVLTEACAPSGLYWLVTLLVVVCALLPYFSYRAFQTRFRPMYHDIVQKKYDNDESEMSQEVLPNRVKGKLTHLRKKLKQREL 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0283 1193 Pfam Phospholipid-translocating ATPase N-terminal 40 103 IPR032631 -
Sto13g0283 1193 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 4 1173 - -
Sto13g0283 1193 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Sto13g0283 1193 SFLD p-type atpase 406 924 IPR044492 -
Sto13g0283 1193 MobiDBLite consensus disorder prediction 461 484 - -
Sto13g0283 1193 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 841 955 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto13g0283 1193 Pfam E1-E2 ATPase 136 324 - -
Sto13g0283 1193 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 1151 IPR023298 -
Sto13g0283 1193 CDD P-type_ATPase_APLT_Dnf-like 57 1033 - -
Sto13g0283 1193 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 431 665 IPR023299 GO:0000166
Sto13g0283 1193 Gene3D - 111 287 - -
Sto13g0283 1193 Coils Coil 783 803 - -
Sto13g0283 1193 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Sto13g0283 1193 PRINTS P-type cation-transporting ATPase superfamily signature 873 892 - -
Sto13g0283 1193 SFLD Haloacid Dehalogenase 406 924 - -
Sto13g0283 1193 SUPERFAMILY Calcium ATPase, transduction domain A 143 285 IPR008250 -
Sto13g0283 1193 Coils Coil 116 136 - -
Sto13g0283 1193 Pfam Phospholipid-translocating P-type ATPase C-terminal 901 1151 IPR032630 -
Sto13g0283 1193 Gene3D - 548 702 IPR023299 GO:0000166
Sto13g0283 1193 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 4 1173 - -
Sto13g0283 1193 Gene3D - 703 913 IPR023214 -
Sto13g0283 1193 Pfam Cation transport ATPase (P-type) 538 629 - -
Sto13g0283 1193 SUPERFAMILY HAD-like 419 928 IPR036412 -
Sto13g0283 1193 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1159 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0283 Sto-Chr13 2560627 2570094 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0283 9 1158 Primary Pumps ATPases AT1G68710 65.421 0.0 1630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0283 K01530 - gmx:100817020 2063.11