Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0279 ATGGCATCCAATCTCCCCCCTGGCTTCCGATTCCACCCCACGGACGAAGAGCTCATTCTCCACTACCTCCGAAAGAAGGTCGCCTCCATCCCCATCCCCGTTTCCATCATTGCCGAAGTCGACATCTACAAGTTCGATCCCTGGCAATTACCTGAGAAGGCGGCGTTTGGGGACAAGGAATGGTACTTCTTCAGTCCGAGAGACCGCAAGTATCCGAACGGAGCTCGGCCAAACAGGGCAGCCGGTTCGGGTTACTGGAAGGCGACGGGGACGGATAAGACCATTGCGGCGGCGAGAGGCGGCGGCGGAGGTGGGAACATGGGGGTGAAGAAAGCTCTGGTTTTCTACACAGGAAAACCCCCAAAAGGTGTGAAGACCAATTGGATCATGCATGAGTATCGCCTTCTTGATCATCACCACAGAAACACCCCCATCATCAAGTCCGAATCATCATCCTCCTCCACCATCATGACCATGAGGTTGGACGACTGGGTGCTTTGCCGGATATACAAGAAGTCCAAGTATGTAGCGGAATGTCCCACATCGGAAGGAGATGGGGTGGTGGGGGACCTTGATATAGCGGAAGATCAGATTCTTTCAGTCAACAATATAAATACTacttccccttctcctcctcctctgattTCCCAGAAATCAATGTCCTTCTCGAACCTTCTAGACGCCACGGACTACTCCATGTTAAGCAGTATCTTGTGTGAGAACCAATCAATTATCTCTGCCCCACCCGGGTTCGGATCTGGGAATCCGAATCCTCAACAAACCCAACAATTCAATTCGAACCCGCCACTCCCAACCATGGAAACCAACAATAAGCGTCAGCTCGCAGTTACTCATGACGAAGATGCGTTATACCCATCAAAGaagtattcttcttcttcttcttgcaaTTTCGTGAATAATAATAGCAACCCACAATATTACGAGAACCCACCACCATGGAACTTGGTTCTCAAGCAGTCGTTGTTGAATCAGCAGTTGCTTCTGGGCCCTCCTCATCTTGGCTTCCAGGGATAA 1035 0.4831 MASNLPPGFRFHPTDEELILHYLRKKVASIPIPVSIIAEVDIYKFDPWQLPEKAAFGDKEWYFFSPRDRKYPNGARPNRAAGSGYWKATGTDKTIAAARGGGGGGNMGVKKALVFYTGKPPKGVKTNWIMHEYRLLDHHHRNTPIIKSESSSSSTIMTMRLDDWVLCRIYKKSKYVAECPTSEGDGVVGDLDIAEDQILSVNNINTTSPSPPPLISQKSMSFSNLLDATDYSMLSSILCENQSIISAPPGFGSGNPNPQQTQQFNSNPPLPTMETNNKRQLAVTHDEDALYPSKKYSSSSSCNFVNNNSNPQYYENPPPWNLVLKQSLLNQQLLLGPPHLGFQG 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0279 344 Pfam No apical meristem (NAM) protein 6 135 IPR003441 GO:0003677|GO:0006355
Sto13g0279 344 Gene3D NAC domain 14 177 IPR036093 GO:0003677|GO:0006355
Sto13g0279 344 SUPERFAMILY NAC domain 3 172 IPR036093 GO:0003677|GO:0006355
Sto13g0279 344 MobiDBLite consensus disorder prediction 249 274 - -
Sto13g0279 344 ProSiteProfiles NAC domain profile. 5 172 IPR003441 GO:0003677|GO:0006355
Sto13g0279 344 PANTHER OS01G0104200 PROTEIN 3 293 - -
Sto13g0279 344 PANTHER NAC TRANSCRIPTION FACTOR 56 3 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0279 Sto-Chr13 2512971 2514447 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0279 3 344 NAC Transcription Factor Family AT3G04070 50.000 1.88e-95 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto13g0279 NAM 6.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0279 - - gmx:100301906 349.747