Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0275 ATGACCGTGAAAACTCAAATGGCTGATCTTTCTAGTAGTGAATCGGAGATGGATTCTTCAGATGAGGGTGTGGCAACATCAACAAAGCCGGGACGAAAGCGTTCCAGGCATGAAACAATAGTTGGCCCTGCCATTGACAAAGATGTAGCTCATGAGGCTGTTGGAGTAAAGCCAGCCACATTGGTCCCGAAGGAAATCCCAGTGATTAAAAAGAGGAACCCTGTCTTACAGATAAAAATTGCGCCCAAAGCAATCCAGAATGAACATAAGGATGATGACATGACTGAAGAGCTAATGGAGCCAGGGAAAGAAATTTTGGATCCTAAAACATTTTTGACTCCAGAAGAATTAGAGAGTGGAAAGTTGCCTCCAGAGGATCTTTTATCTCTTCCAATGTTTAAGAACTATACAGCTGGAAATCCTGCTCCTGTGTTGTATATCAAGAATTTGGCAAAAGATGTGATTGCTGATgatttccatttcatatttgGGTCCTTATTTGGAAATATTGAGGCTGCAAGGTCTGTTCTTCAAGTCAAGCTGATGCAGGAAGGAAGGATGAGGGGTCAAGCATTTATAACATTCCCATCAATTGATCTGGCTCAGCATGCTTTGAATCTAGTGAATGGGTATGTATTCAAAGGCAAGCCAATGATCATTCAGTTTGGTCGCAATCCTGCTGCTTCCAAAGGAACATAG 699 0.4134 MTVKTQMADLSSSESEMDSSDEGVATSTKPGRKRSRHETIVGPAIDKDVAHEAVGVKPATLVPKEIPVIKKRNPVLQIKIAPKAIQNEHKDDDMTEELMEPGKEILDPKTFLTPEELESGKLPPEDLLSLPMFKNYTAGNPAPVLYIKNLAKDVIADDFHFIFGSLFGNIEAARSVLQVKLMQEGRMRGQAFITFPSIDLAQHALNLVNGYVFKGKPMIIQFGRNPAASKGT 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0275 232 PANTHER UNCHARACTERIZED 4 230 IPR045164 -
Sto13g0275 232 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 143 225 IPR000504 GO:0003723
Sto13g0275 232 PANTHER RNA-BINDING REGION-CONTAINING PROTEIN 3 4 230 - -
Sto13g0275 232 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 145 217 IPR000504 GO:0003723
Sto13g0275 232 Gene3D - 138 231 IPR012677 -
Sto13g0275 232 SMART rrm1_1 144 221 IPR000504 GO:0003723
Sto13g0275 232 MobiDBLite consensus disorder prediction 1 26 - -
Sto13g0275 232 MobiDBLite consensus disorder prediction 1 38 - -
Sto13g0275 232 CDD RRM2_RBM40_like 144 223 - -
Sto13g0275 232 SUPERFAMILY RNA-binding domain, RBD 120 227 IPR035979 GO:0003676
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0275 145 221 Eukaryotic Initiation Factors Gene Family AT3G16380 29.870 7.08e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0275 K13157 - gmx:100818499 354.369