Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0269 ATGGGAAAGAATGAGTTTTTGACGCCAAAGGCCATTGCTAATCGAATCAAAGCGAAAGGGCTGCAGAAGCTTCGGTGGTATTGCCAAATGTGTCAGAAGCAATGCAGAGATGAGAATGGATTCAAGTGTCATTGCATGAGTGAAAGCCACCAGCGTCAAATGGAAATATTCGGACAAAACCCGCATCGGATAATTGAGGGTTACACTGAAGAGTTTGAGAATACTTTCCTCGAGCATATGAAGCGCAGCCACCGGTTCAGTCGCGTAGCAGCCACAGTAGTTTACAATGAGTACATTAATGATAGACACCATATTCATATGAATTCCACCCAGTGGGCTACACTAACTGAGTTTGTCAAGCATTTGGGTCGGACTGGCAAATGTAAGGTTGAAGAAACACCAAAGGGTTGGTTCATCACATACATTGACAGAGATTCAGAGACACTTTTCAAAGAGAggatgaaaaataagagaataaaGGCAGACATGGCAGAAGAAGAAAAGCAAGAGGAAGAAATAAGGAAACAAATAGGGAAAGCCGAGCAGTTGATGCAATCATCTACTTCTGGGTCTGACAAGTCCTTACAGGCTGAGCTTCCTAGGGAATTTCAAGTGGAAGATGGAATTAAGATTGGATTTGCTCTTGGTTCATCAGCTAAACCTGCAGTAGCCAAGGAAAAACAGCAGGGGCCAAAGGGAGTGTTCGATGAGGTCGAAGATGCAAGAAATGAAGAGAGGAGGAATCCTGGAAGTTCTTTAAAGAGGAaagtgagtggtggtggtggtggtaaaTCAGCATTGGATGAATTGatgaaggaggaagaaaagaaaagggaaaaaattaACAGGAAGGATTATTGGCTGCATGAAGGAATTGTTGTTAAGGTAATGAGCAAAGCTCTGGCTAATGAAGGGTATTACAAACAAAAGGGTGTTGTGTTAAAGGTGATGGAAAAATATGTTGGGGAAATAGAAATGCTTGAAAGCAAGCATGTGCTCAGAGTTGATCAAGAAGAACTTGAAACTGTGATTCCCCAAATTGGGGGTCTCGTCAAAATTGTAAACGGGGCATATCGTGGATCGATAGCAAGATTGTTAGGGATCGATACTGATCACTTTTGTGCTAAAGTGAAAATAGAGAAAGGTCCTTACGTTGGTAGAGTGCTTAAGGCTGTGGAATATGAGGATATTTGTAAAATTGCCCAGTGA 1209 0.3962 MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMEIFGQNPHRIIEGYTEEFENTFLEHMKRSHRFSRVAATVVYNEYINDRHHIHMNSTQWATLTEFVKHLGRTGKCKVEETPKGWFITYIDRDSETLFKERMKNKRIKADMAEEEKQEEEIRKQIGKAEQLMQSSTSGSDKSLQAELPREFQVEDGIKIGFALGSSAKPAVAKEKQQGPKGVFDEVEDARNEERRNPGSSLKRKVSGGGGGKSALDELMKEEEKKREKINRKDYWLHEGIVVKVMSKALANEGYYKQKGVVLKVMEKYVGEIEMLESKHVLRVDQEELETVIPQIGGLVKIVNGAYRGSIARLLGIDTDHFCAKVKIEKGPYVGRVLKAVEYEDICKIAQ 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0269 402 Pfam Domain of Kin17 curved DNA-binding protein 52 177 IPR019447 -
Sto13g0269 402 SUPERFAMILY beta-beta-alpha zinc fingers 26 66 IPR036236 -
Sto13g0269 402 Gene3D - 291 344 - -
Sto13g0269 402 SMART Kin17_mid_2 52 178 IPR019447 -
Sto13g0269 402 Coils Coil 154 186 - -
Sto13g0269 402 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 401 IPR037321 -
Sto13g0269 402 CDD KOW_KIN17 347 400 IPR041995 -
Sto13g0269 402 Pfam KN17 SH3-like C-terminal domain 283 336 IPR041330 -
Sto13g0269 402 Coils Coil 264 284 - -
Sto13g0269 402 Gene3D - 345 401 IPR014722 -
Sto13g0269 402 MobiDBLite consensus disorder prediction 220 273 - -
Sto13g0269 402 PANTHER BNAA05G13760D PROTEIN 1 401 - -
Sto13g0269 402 MobiDBLite consensus disorder prediction 230 252 - -
Sto13g0269 402 Gene3D - 60 160 IPR038254 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0269 Sto-Chr13 2399334 2400542 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0269 1 401 C2H2 Transcription Factor Family AT1G55460 69.305 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0269 K13102 - gmx:100784271 644.81