Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0262 ATGGCAATTGCACGAACAGGAGTCTACGTCGATGACTATCTGGAGTACGCGAGCACATTGCCTGCTGAGCTTCAGAGGCTGCTTAATACCATCAGAGAACTCGATGACCGATCCCAATCTATGATAAACCAGACGAGACAGCAGACAAAGTACTGTTTAGGGTTGTCATCACATGGCTTTAGGAAGGGTAATCATAACAGTAGCCATAATCATAATAGCAGTTACATGAATGAAGAAGACGACATCGCAATTGAGAAAATGCGAAAAGAAATTGAAGCGAATCAAGACAGTGCATTTAGTCTTTGTACTGAGAAGGTTTTATTGGCAAGGCAAGCATATGACCTGATAGATAGCCATGTAAAGCGACTTGATGAGGATTTGAACAACTTTGCTGAGGATCTAAAACAAGAGGGGAAAATACCACCAGATGAACCAGCGGTTCTCCCCCCATTGCCTATAGTTGTTAAAAGTGAAAAACGCAAGTATGGAACACCTCAATCAAAGAGACTTGAATACAGGGATAGGGATTGGGATAGAGACCGTGATAGGGACTTTGAGCTCATGCCCCCACCAGGAAGCCATAAAAAGGAGTATACAACTCCTATTGATTTTGATCAACCCATTGATCCAAATGAACCTACATATTGTGTTTGCCATCAGGTGTCTTTTGGTGATATGATTGCATGTGACAATGAAAATTGCCAAGGAGGTGAATGGTTCCACTATGCATGTGTTGGCCTAACGCCAGAGACAAGATTCAAGGGAAAGTGGTATTGCCCAACCTGCAAATTACTTCCACAATGTCAATGA 810 0.4247 MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMINQTRQQTKYCLGLSSHGFRKGNHNSSHNHNSSYMNEEDDIAIEKMRKEIEANQDSAFSLCTEKVLLARQAYDLIDSHVKRLDEDLNNFAEDLKQEGKIPPDEPAVLPPLPIVVKSEKRKYGTPQSKRLEYRDRDWDRDRDRDFELMPPPGSHKKEYTTPIDFDQPIDPNEPTYCVCHQVSFGDMIACDNENCQGGEWFHYACVGLTPETRFKGKWYCPTCKLLPQCQ 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0262 269 Gene3D - 5 128 - -
Sto13g0262 269 Pfam PHD-finger 215 263 IPR019787 -
Sto13g0262 269 Coils Coil 24 44 - -
Sto13g0262 269 Pfam Inhibitor of growth proteins N-terminal histone-binding 9 130 IPR024610 -
Sto13g0262 269 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 207 264 IPR013083 -
Sto13g0262 269 ProSiteProfiles Zinc finger PHD-type profile. 213 265 IPR019787 -
Sto13g0262 269 SMART ING_2 9 130 IPR024610 -
Sto13g0262 269 CDD PHD_ING 215 262 - -
Sto13g0262 269 PANTHER PHD FINGER PROTEIN ING2 2 265 - -
Sto13g0262 269 SMART PHD_3 215 263 IPR001965 -
Sto13g0262 269 CDD ING_plant 17 127 - -
Sto13g0262 269 PANTHER INHIBITOR OF GROWTH PROTEIN 2 265 IPR028651 -
Sto13g0262 269 SUPERFAMILY FYVE/PHD zinc finger 191 263 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0262 Sto-Chr13 2342695 2346679 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Sto13g0262 ING 4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0262 K11346 - gmx:100787916 478.789