Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0245 ATGAAATCCGTTATGAAGTCTGACCCACTCAAGTGGGGTCTGGCCTCTGAGAGTCTCATGGGGAGCCACTTGGAGGAGGTGAAGCGCATGGTGGCGGAGTACCGGAAGCAGGTGGTCCGGCTGGGCGGCGACACACTGACCGTGGCTCAGGTGGCTGCCGTCGCAGCCCGTGATCAAGGCGTGACGAAGGCGGCGGTCGAGCTGTCGGAGTCCGCCGAGGCCGGCGTTAAGGCCAGCAGCGACTGGGTCATGGACAGCATGAGCAACGGCACTGATACTTACGGCATCACCACTGGCTTCGGTGCTAGTTCACACAAGCGAACTAAACATGGGGCTGCCTTGCAGAAAGAGCTCATTAGGTTTTTGAATGCTGGAATATTTGGTAACGGCACAGAGTCATGTCAAACTCTACCACACTCGGCCACGAGAGCAGCCATGGTAGTGAGAATAAACTCTCTTCTCCAAGGATACTCTGGAATCCGATTTGAAATCCTAGAGGCCATCACTAAGTTGCTCAACCACAACATCACTCCATGCTTGCCTCTTCGCGGTTCAATCACAGCCTCCGGCGATATCGTCCCTCTTTCTTACATCGTCGGTTTACTTACCGGAAGACCTAATTCCAAAGCTGTTGGTCCCAACGGAGAAATCCTCGATCCCAAGCAAGCTTTCCGATTGGCTGGCATCCATTCCGACTTCTTTGAATTGCAGCCCAAGGAAGGGCTTGCTCTTGTAAATGGAACCGCTGTTGGTTCTGCCTTGGCTTCTATGGTTCTCTTCGAGGCTAATATTTTGGCTGTGCTTTCTGAAGTTCTCTCTGCTATTTTCGCTGAAGTGATGCTATGTAGGCTTCCTGAATTTACCGACCATTTGACGCATAAGTTGAAGCACCATCCTGGCCAGATTGAGGCTGCTGCTATCATGGAACATATTTTGGATGGAAGCTCCTTTGTTAAAGTTGCTAAGAAGTATCACGAGATTGATCCCTTGCAGAAGCTTAAACAAGATCGCTATGCTATTCGAACCTCACCCCAATGGCTTGGCCCTCTCATTGAAGTTATCCGATTCTCCACAAAGTCAATTGAGAGAGAGATCAACTCTGTCAATGACAACCCCTTGATTGACGTTTCAAGAAACAAGGCCTTGCACTGTGGTAATTTCCAAGGAACCCCCATTGGAGTCTCCATGGACAATACACGTCTAGCTATTGCTTCCATAGGTAAACTCATGTTTGCTCAATTCTCCGAGCTTGTTAATGAATTTTACAACAATGGATTGCCATCTAATCTCTCTGTTAGTAGAAACCCTAGCTTGGATTATGGTTTCAATGGAGCCGAAATCGCAATGGCTTCTTACTGCTCTGAACTCCAATACCTTGCTAATCCCGTAACGACCCACGTCCAAAGTACAGAGCAGCACAACCAAGATGTTAACTCTTTGGGTCTGATCTCGTCTAGGAAAACAAACGAAGCTATTGAGATCTTGAAGCTAATGTCTTCCACGTTTTTGGTTGCACTATGTCAAGCAATTGACTTGAGGCACTTGGAAGAGAATTTAAAGAATACAGTGAAGAACACAGTGAGCCAAGTTGCTAAGAGAACTCTTACCACAGGTGTGAATGGAGAATTGTATCCTTCCAGATTCTGTGAGAAGAATTTGTTGAAAGTCGTGGATAAGGAGCACGTGTTTGCCTACGTTGATGATCCCTGCAATACTACATACCCATTGATGCAAAAACTAAGGCATGTCCTTGTGGATCATGCACTAGCTAATGCTGAAAACGAGAAGAATGTGAGCACATCAATCTTCCAAAAGATTGGAACCTTTGACGAGGAGTTGAAGAGTGTATTGCCTAAGGAGGTTGAGAGTGCAAGAGCAGCATATGAGAGTGGGAATTCTGCAATTACAAATAGAATCAAGGAATGTAGGTCATATCCTCTGTACAAGTTTGTGAGAGAGGAGTTGGGAATTGGGTTGCTAACCGGAGAGAAGGTGATTTCCCCAGGTGAAGAATGTGACAAAGTGTTCATAGCCATGTGTCAGGGCAAGATTATCGATCCTCTTCTGGAGTGCCTTGGGGAGTGGAACGGTGCTCCTCTTCCTCTGTGCTAG 2112 0.4721 MKSVMKSDPLKWGLASESLMGSHLEEVKRMVAEYRKQVVRLGGDTLTVAQVAAVAARDQGVTKAAVELSESAEAGVKASSDWVMDSMSNGTDTYGITTGFGASSHKRTKHGAALQKELIRFLNAGIFGNGTESCQTLPHSATRAAMVVRINSLLQGYSGIRFEILEAITKLLNHNITPCLPLRGSITASGDIVPLSYIVGLLTGRPNSKAVGPNGEILDPKQAFRLAGIHSDFFELQPKEGLALVNGTAVGSALASMVLFEANILAVLSEVLSAIFAEVMLCRLPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSFVKVAKKYHEIDPLQKLKQDRYAIRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHCGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNEFYNNGLPSNLSVSRNPSLDYGFNGAEIAMASYCSELQYLANPVTTHVQSTEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLVALCQAIDLRHLEENLKNTVKNTVSQVAKRTLTTGVNGELYPSRFCEKNLLKVVDKEHVFAYVDDPCNTTYPLMQKLRHVLVDHALANAENEKNVSTSIFQKIGTFDEELKSVLPKEVESARAAYESGNSAITNRIKECRSYPLYKFVREELGIGLLTGEKVISPGEECDKVFIAMCQGKIIDPLLECLGEWNGAPLPLC 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0245 703 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 8 692 IPR005922 GO:0005737|GO:0006559|GO:0016841
Sto13g0245 703 SUPERFAMILY L-aspartase-like 8 703 IPR008948 GO:0003824
Sto13g0245 703 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 6 703 - -
Sto13g0245 703 Gene3D - 516 637 IPR023144 -
Sto13g0245 703 Gene3D - 1 248 IPR024083 -
Sto13g0245 703 Gene3D Fumarase/aspartase (Central domain) 249 698 - -
Sto13g0245 703 PANTHER HISTIDINE AMMONIA-LYASE 6 703 IPR001106 -
Sto13g0245 703 CDD PAL-HAL 63 513 IPR001106 -
Sto13g0245 703 Pfam Aromatic amino acid lyase 46 526 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0245 Sto-Chr13 2189507 2195197 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0245 8 703 Monolignol Biosynthesis Gene Families AT2G37040 79.310 0.0 1177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0245 K10775 - gmx:100811101 1184.86