Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0217 ATGATGGCCGATCATTCGcagcctcctcctcctcctcctcctcctcctcctcggcGCGCCACCAAAGCCGCCGCGCCGCCGCCTAATAAAAAGCGTTCTTCTGCGGCCGCGGCTCCTCCCTGCGGGGCCTGCAAGTTCCTCAGGAGGAAGTGCATGAGCGGCTGCATCTTCGCGCCGCATTTCGGCTCCGACCAGGGCGCGGCTCGCTTCGCGGCCGTGCACAAGGTGTTCGGCGCTAGCAATGTGTCCAAGCTACTCTTGCAAATTCCGGCCAACCGCCGCCACGATGCGGTGGTGACTATATCCTATGAGGCTCAGGCGCGACTGTCCGATCCTGTTTACGGCTGCGTCTCCACCATTCTTGCTTTGCAACAGcaggtttatttatttatttattttctaatatatatatatatatcaaaaatttttcttcttcaattcttatGCAATTACGTGGCATGTCTGCAAGCAGAAGTGAATATGATCCAAAGCCAGCGGCTTCACCCCTTCTGCGTTCGAGCTTGCAACCACAATGATGGATCATCCTCCAGCTCCAAATCATCAAACACCATTGCTCTCACTGCAGGATCATcatga 597 0.4707 MMADHSQPPPPPPPPPPRRATKAAAPPPNKKRSSAAAAPPCGACKFLRRKCMSGCIFAPHFGSDQGAARFAAVHKVFGASNVSKLLLQIPANRRHDAVVTISYEAQARLSDPVYGCVSTILALQQQVYLFIYFLIYIYISKIFLLQFLCNYVACLQAEVNMIQSQRLHPFCVRACNHNDGSSSSSKSSNTIALTAGSS 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0217 198 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 29 128 - -
Sto13g0217 198 ProSiteProfiles LOB domain profile. 39 142 IPR004883 -
Sto13g0217 198 PANTHER LOB DOMAIN CONTAINING PROTEIN 29 128 - -
Sto13g0217 198 MobiDBLite consensus disorder prediction 1 37 - -
Sto13g0217 198 MobiDBLite consensus disorder prediction 178 198 - -
Sto13g0217 198 Pfam Lateral organ boundaries (LOB) domain 40 128 IPR004883 -
Sto13g0217 198 MobiDBLite consensus disorder prediction 1 23 - -
Sto13g0217 198 SUPERFAMILY Formin homology 2 domain (FH2 domain) 8 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0217 Sto-Chr13 1904458 1906329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0217 40 165 AS2 family AT3G03760 73.016 1.51e-58 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto13g0217 LOB 4.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0217 - - ahf:112698228 181.8