Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0208 ATGACAAAAACGATAAAACAAATGAGAAATTTCACGTTAACCGACGATGAAGCTGCTTTATGCATCGCCATTAGTGGGAGCAGACAAAAGCTTGATGTGAAGTGGGTGGGTCAGTGTCCAACCCTTTACGCTCTCATAAATCCATCGTCATGCCGTTTTTCCATGGATTCCTCGGTTCGTGTGTTTAATCGCAAGCGTTATTGTGTTCTGTTCGTTTTTCTGATATGCGTTGTTCCAGTGATCGCCGATTTCCACTCTTCGGAACACGATGTTCCGAGAAACCGCGTTGGTTTTGTTGGTGGTAGTAAGCAGATTTGCAAGAGCTTACAGGGTCTTGATGATTAcgaagcaaaatgtttacaccTCAAATCCAACGATCCATGTGTGTCTCAGGGTTATATAGACTATCTTTACCTTTTCTATTGCAAATTTGGGCGATTCCCATTCTTGGGTTATATTCTCTTGTTTCTTTGGCTTCTTGTTCTGTTTTATCTGCTGGCTGATACTGCTTCTGAGTACTTTTGTCCTTCACTTGAAAACCTATCCAAAATACTGAGGCTATCCCCCACAATTGCTGGAGTCACGCTTCTTTCTCTTGGTAATGGAGCTACTGACGTTTTTGCTAGCCTTGTGTCATTCAAAGGAAGTGGTACGAGTGGCATTGGGTTCAACACAGTGCTTGGTGGTGCTTCCTTTGTGTCCTGTGTTGTGGTGGGGATACTGAGTATCTCAGTGCGCCATAGGAGGATTCATGTTAAGAAATCTGCTTTCATTAGAGATGTTTGTTTCCTTCTTTTGGTTCTTCTGTGCTTGTTTACCATATTGATCTCTGGGGAGATTAACGTTCTTGGGGCAATTGGTTTTGCTTCCATGTACATAGTGTATGCAGTTTTTGTTTATATCTCATCCACACGGTGGAAGGGTGTGTGTGGTGGAGACACTGAAAGGGATGGTAGTACTAGTGACTTTAGTGTGCCTCTTCGTGGTGATAGAGAAAGAGGATTGTTTGATGATGTTGAGGAAGGAGCTAGAGATTGTTCCctgaaaatcaagaaaaaatgCGGAGGATGTATGAGATCTCCAGTATGTAGAATTTCACTTTGTGTGCTGAAGATGCCTCTGTATTTGCCCAGGAGATTAACAATTCCTCTTGTTTCTGAAGAGAATTGGTCAAAGCCCTATGCCATTTCCTCAGTTGTATTATCACCACTCCTCTTATCTGCTGTGTGGAACTTTTACAAGGAAAAAAGCTCCTTCAACACCAGCCTTATAGtttatggaattggattgtTGATTGGGATTACACTAGGGCTAACTGCGTTTTTCACTACAGAACAATCTACGCCACCAAGGAAGTACTTGTTTCTTTGGCTCGCAGGAGGCTTCATAATGAGTGTGACTTGGAGTTACATTTCTGCTCAGGAGTTGGTGGGGTTATTGGTTTCACTTGGCTACATATTTGGAATAAGTCCTTCAATATTGGGACTCACAGTCCTTGCCTGGGGAAACTCACTTGGTGATTTGATGACAAATTTAACAGTGGCTTTAAATGGTGGGCCAGAAGGTGCTCAAATAGCAATATCAGGTTGCTATGCTGGTCCTATCTTCAATACTCTCATTGGCTTGGGCTTGTCTCTTATAACATCAACTTGGTCACAATACCCATCATCTATTGTGATTCCTAGTGACCCATATCTCTTGGAGACAATGGTGATTCTGGCGTTTGGGTTGGTTTGGGCACTTGTGGTTTTGATCACAAGAGATATGAGGCTTGATGGAGTCCTAGGAGGAGGGCTTTTAGTTATTTACTTCATTTCTGTGCTTCTCAGGCTGATTCAGACATTTGGGCCTTTCCAACTCCCAGATATGTTAGTCTTCTTACCCTTTAGAAGATGA 1896 0.4151 MTKTIKQMRNFTLTDDEAALCIAISGSRQKLDVKWVGQCPTLYALINPSSCRFSMDSSVRVFNRKRYCVLFVFLICVVPVIADFHSSEHDVPRNRVGFVGGSKQICKSLQGLDDYEAKCLHLKSNDPCVSQGYIDYLYLFYCKFGRFPFLGYILLFLWLLVLFYLLADTASEYFCPSLENLSKILRLSPTIAGVTLLSLGNGATDVFASLVSFKGSGTSGIGFNTVLGGASFVSCVVVGILSISVRHRRIHVKKSAFIRDVCFLLLVLLCLFTILISGEINVLGAIGFASMYIVYAVFVYISSTRWKGVCGGDTERDGSTSDFSVPLRGDRERGLFDDVEEGARDCSLKIKKKCGGCMRSPVCRISLCVLKMPLYLPRRLTIPLVSEENWSKPYAISSVVLSPLLLSAVWNFYKEKSSFNTSLIVYGIGLLIGITLGLTAFFTTEQSTPPRKYLFLWLAGGFIMSVTWSYISAQELVGLLVSLGYIFGISPSILGLTVLAWGNSLGDLMTNLTVALNGGPEGAQIAISGCYAGPIFNTLIGLGLSLITSTWSQYPSSIVIPSDPYLLETMVILAFGLVWALVVLITRDMRLDGVLGGGLLVIYFISVLLRLIQTFGPFQLPDMLVFLPFRR 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0208 631 Pfam Sodium/calcium exchanger protein 156 300 IPR004837 GO:0016021|GO:0055085
Sto13g0208 631 Pfam Sodium/calcium exchanger protein 458 610 IPR004837 GO:0016021|GO:0055085
Sto13g0208 631 Gene3D - 187 312 IPR044880 -
Sto13g0208 631 Gene3D - 395 611 IPR044880 -
Sto13g0208 631 PANTHER CATION CALCIUM EXCHANGER 71 619 - -
Sto13g0208 631 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 71 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0208 Sto-Chr13 1789406 1791389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0208 62 616 Antiporters AT5G17850 53.451 1.41e-172 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0208 K13754 - gmx:100787016 702.975