Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0204 ATGGCTGAACGTGGCAGCGGAGATCGTGGCGGCTTCGGCCGTGGCTTCGGTGGTCGTGGTGGACGCGGTGACCGCGGTCGTGGAGGCCGCCGCAGAGGCGCCGGTCGTCGCGAAGAAGAGGAGAAATGGGTTCCAGTGACTAAGCTTGGCCGTCTCGTCAAAGAAGGTAGGATCCGCAGCCTCGAGCAGATCTATCTCCATTCTTATCCAATCAAGGAACACCAGATCGTCGATACCTTGGTTGGTCCCAGCCTCAAGGACGAGGTCATGAAGATCATGCCGGTCCAGAAGCTTTCGGTGATTCCTGTGAGAAGAGGATATTGGGGTAACAAGATCGGGAAGCCGCATACAGTTCCGTGCAAGGTTACTGGAAAGTGTGGTTCCGTCACAGTGAGGATGGTTCCTGCTCCTCGTGGTGCCGGAATTGTTGCTGCTAGGGTTCCGAAGAAGGTATTGCAGTTTGCAGGAATTGAAGATGTCTTCACTTCTTCGCGTGGGTCGACGAAGACACTTGGAAATTTCGTCAAGGCAACTTTTGATTGTTTGATGAAATCTTATGGATTCTTAACGCCTGAATTCTGGAAGGAGACCCGCTTCACCAAATCTCCATTCCAAGAGTACACTGATCTTCTTGCAAAACCAACAGGGAAGGCTCTAATCCTTGAGGAGGACAAGGTGGATGCTTGA 687 0.524 MAERGSGDRGGFGRGFGGRGGRGDRGRGGRRRGAGRREEEEKWVPVTKLGRLVKEGRIRSLEQIYLHSYPIKEHQIVDTLVGPSLKDEVMKIMPVQKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLMKSYGFLTPEFWKETRFTKSPFQEYTDLLAKPTGKALILEEDKVDA 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0204 228 PANTHER RIBOSOMAL S SUBUNIT 97 226 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Sto13g0204 228 PANTHER RIBOSOMAL S SUBUNIT 1 97 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Sto13g0204 228 MobiDBLite consensus disorder prediction 1 41 - -
Sto13g0204 228 MobiDBLite consensus disorder prediction 20 41 - -
Sto13g0204 228 SUPERFAMILY Ribosomal protein S5 domain 2-like 116 196 IPR020568 -
Sto13g0204 228 Pfam Ribosomal protein S5, C-terminal domain 124 196 IPR005324 GO:0003735|GO:0005840|GO:0006412
Sto13g0204 228 PANTHER 40S RIBOSOMAL PROTEIN S2-1-RELATED 97 226 - -
Sto13g0204 228 PANTHER 40S RIBOSOMAL PROTEIN S2-1-RELATED 1 97 - -
Sto13g0204 228 Gene3D - 42 102 - -
Sto13g0204 228 Gene3D - 103 196 IPR014721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0204 Sto-Chr13 1751374 1753281 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0204 39 216 Cytoplasmic Ribosomal Protein Gene Family AT3G57490 69.955 1.74e-108 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0204 K02981 - gmx:100797105 356.295