Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0193 ATGGGAAGACCTCCTTGCTGTGATAAAGTTGGAATCAAGAAAGGTCCATGGACACCTGAGGAAGATATCATTCTTGTTTCTTACATCCAAGAACATGGCCCGGGAAACTGGAGATCTGTGCCAACTAATACTGGATTGTCAAGATGCAGCAAAAGTTGCAGGCTAAGATGGACTAATTACTTGAGGCCAGGAATCAAAAGAGGAAACTTCACTCCTCATGAAGAGGGTATGATCATTCACTTGCAGGCTCTTCTGGGTAACAAATGGGCAGCCATAGCTTCATATCTTCCTCAGAGAACAGACAATGACATAAAGAATTACTGGAACACCCATCTGAAGAAGAAGCTGAAGAAATTCCAAGCAGGATTAATGGATTCTAATAATAATTTTGggccaccatcatcatcatcagaaacaacaacaacattaCCAaacccatcttcttcttcttcttcttcttcttcttctctttttgcCTCAAACATTAGCTTCCATGACAGAACAAATTTAAGCCACTCCcactctgcttcttcttcttcatcatcttcctccacCACCTATGCCTCAAGCACTGAGAACATCTCACGCCTCTTGCAAGGGTGGATGAtgagatcatcatcatcatcatcaactccATCATCATTACTAAAGCCAGAAATCTCCAAAGACAAACAGATTCTTCATCATCAAAACGACAGCAGCAACAAGAAGAACATTCTTCAAGAGTTTGATTCTTCTATGTTGTCGTCGTtcgatgatgataatgatgatgacaaACAGAGATCGGATATTAACAGTAATGGGAGTGATCCTCCATTGTTGTTCCTTGAGAAGTGGCTGTTTGAAGAAAGTAATGTGGGCCATGAGGACATGATGGAGCTATCCCCTATGTTCTAA 897 0.3378 MGRPPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLSRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQAGLMDSNNNFGPPSSSSETTTTLPNPSSSSSSSSSSLFASNISFHDRTNLSHSHSASSSSSSSSTTYASSTENISRLLQGWMMRSSSSSSTPSSLLKPEISKDKQILHHQNDSSNKKNILQEFDSSMLSSFDDDNDDDKQRSDINSNGSDPPLLFLEKWLFEESNVGHEDMMELSPMF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0193 298 CDD SANT 69 112 IPR001005 -
Sto13g0193 298 MobiDBLite consensus disorder prediction 169 188 - -
Sto13g0193 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Sto13g0193 298 CDD SANT 16 61 IPR001005 -
Sto13g0193 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Sto13g0193 298 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 287 - -
Sto13g0193 298 MobiDBLite consensus disorder prediction 123 154 - -
Sto13g0193 298 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Sto13g0193 298 SMART sant 66 114 IPR001005 -
Sto13g0193 298 SMART sant 13 63 IPR001005 -
Sto13g0193 298 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Sto13g0193 298 Gene3D - 13 66 - -
Sto13g0193 298 Gene3D - 68 130 - -
Sto13g0193 298 MobiDBLite consensus disorder prediction 248 269 - -
Sto13g0193 298 PANTHER TRANSCRIPTION FACTOR MYB60 1 287 - -
Sto13g0193 298 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Sto13g0193 298 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Sto13g0193 298 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0193 Sto-Chr13 1628389 1629853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0193 1 138 MYB Transcription Factor Family AT5G62470 79.710 6.80e-83 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto13g0193 Myb_DNA-binding 1.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0193 K09422 - zju:107433002 305.449