Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0187 ATGGACTATTACAAGATTCTAGGTTTGCAAAGAAACGCTACGAAAGACGAAATCAAATCGGCCTACAAGAAATTGGCCCTTCAATTCCACCCAGACAAGCATTCGCAATCCTCCAAGGCCGTCAGGGACCATGCCACTCTCAGATTCAGGCAGGTCTCTGAGGCTTACGAGGTGCTCATGGATGATCGGAAGCGCGCTGATTACGATATACGATCTCGTGGTGGGAATAGCACTACCAGCACTTATTACGATTACAAACCTAGATACAAATCTACGTCTGGCATTTCTTCGCAATCTTGGCTACGCTGGCTCAACTTCATTTACAATATACGATTTGGCGTTGGTACAAGCAGAAGCGGAAGCGGATTCGGATTCTCTGTTAATTGGAATTATAGTTATACCTTTGGTGGTGGGAATGGCAGAACTTACAATTACAAACCTAGATACAAATTTGGGTCTGGCTTTCGTTCACCAGCATTTCTTCGCAATCTTGGCTTCGTTGGAGCTTTCTTAGGTGAGATGGTTGTTATTGATTTAAGCAAAGCACTGTGGGAGATGCACAAGTCTCAGCTTAATTCTCAATGCATTTGTTTGATTTTCCGTCCTGcttaa 612 0.4363 MDYYKILGLQRNATKDEIKSAYKKLALQFHPDKHSQSSKAVRDHATLRFRQVSEAYEVLMDDRKRADYDIRSRGGNSTTSTYYDYKPRYKSTSGISSQSWLRWLNFIYNIRFGVGTSRSGSGFGFSVNWNYSYTFGGGNGRTYNYKPRYKFGSGFRSPAFLRNLGFVGAFLGEMVVIDLSKALWEMHKSQLNSQCICLIFRPA 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0187 203 CDD DnaJ 2 61 IPR001623 -
Sto13g0187 203 ProSitePatterns Nt-dnaJ domain signature. 49 68 IPR018253 -
Sto13g0187 203 PANTHER CHAPERONE PROTEIN DNAJ 72 1 191 - -
Sto13g0187 203 PANTHER CO-CHAPERONE PROTEIN DJLA 1 191 - -
Sto13g0187 203 Pfam DnaJ domain 2 69 IPR001623 -
Sto13g0187 203 SUPERFAMILY Chaperone J-domain 1 72 IPR036869 -
Sto13g0187 203 SMART dnaj_3 1 64 IPR001623 -
Sto13g0187 203 ProSiteProfiles dnaJ domain profile. 2 72 IPR001623 -
Sto13g0187 203 PRINTS DnaJ domain signature 4 22 IPR001623 -
Sto13g0187 203 PRINTS DnaJ domain signature 22 37 IPR001623 -
Sto13g0187 203 PRINTS DnaJ domain signature 44 64 IPR001623 -
Sto13g0187 203 Gene3D DnaJ domain 1 112 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0187 Sto-Chr13 1567995 1569185 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0187 3 69 C2H2 Transcription Factor Family AT1G74250 43.284 6.09e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0187 - - tcc:18592885 150.214