Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0172 ATGTATCACGCGAAGAAGTTTACGCCGGCAACTCTAGTGCCTCATAAAACTCAAAGTGGAGCTGAGCAACTTGCAAATGTTTCGGATTTGAGTGGATCTGCTGTGAAAAATGCCTCGCCTGTTGGGGGAAGTGGGAAGCAACGATTAAGATGGACATCTGATCTTCATGACCGTTTTGTGGATGCCATTACACAACTTGGTGGACCAGATAGGGCAACACCAAAAGGTGTTCTGAGGGTAATGGGTGTACCAGGACTTACCATTTATCATGTTAAAAGCCATTTACAGAAATATCGCCTTGCAAAGTACCTGCCAGAATCTTCTGCTGATGAATCCAAAGATGACAAAAGAAATTCTGGAGACAGTGTATCTGGCACTGATTCTTCCCCGGGATTGCAAATAAGTGACGCTTTGAGGATGCAGATGGAGGTTCAGAAACGCCTCCATGAACAACTTGAGGTTCAGAAACAGTTACAAATGAGAATTGAAGCTCAAGGTAAATACTTGCAGAAGATCATAGAGGAACAACAAAAACTAGGTAGTACCTTGCGAGCCTCAGAAGTAGTACCATCGTCAAAAGATGATCAAGAGCTTTCCCAATCGGAGCCTTCTGGTGATGCCTCTGCAGAAACATTGCCTCCATTGAAAAAGCAGAGGATTGATGATGGCTCCAAGGATGGCATTACTACCTTCCCAACTGCCAACAAGGACCGCCCAGAAGACTGA 726 0.4477 MYHAKKFTPATLVPHKTQSGAEQLANVSDLSGSAVKNASPVGGSGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESSADESKDDKRNSGDSVSGTDSSPGLQISDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGSTLRASEVVPSSKDDQELSQSEPSGDASAETLPPLKKQRIDDGSKDGITTFPTANKDRPED 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0172 241 MobiDBLite consensus disorder prediction 106 133 - -
Sto13g0172 241 SUPERFAMILY Homeodomain-like 45 100 IPR009057 -
Sto13g0172 241 MobiDBLite consensus disorder prediction 179 241 - -
Sto13g0172 241 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Sto13g0172 241 MobiDBLite consensus disorder prediction 106 121 - -
Sto13g0172 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Sto13g0172 241 Pfam Myb-like DNA-binding domain 49 99 IPR001005 -
Sto13g0172 241 MobiDBLite consensus disorder prediction 179 207 - -
Sto13g0172 241 Pfam MYB-CC type transfactor, LHEQLE motif 132 178 IPR025756 -
Sto13g0172 241 PANTHER OS05G0491500 PROTEIN 2 229 - -
Sto13g0172 241 Gene3D - 45 104 - -
Sto13g0172 241 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 2 229 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0172 Sto-Chr13 1479014 1482336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0172 42 197 G2-like Transcription Factor Family AT4G28610 53.846 3.79e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto13g0172 Myb_DNA-binding 2.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0172 - - gmx:100783132 364.77