Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0161 ATGGGACGAACTTCACTTCTCGTATCGGATTTCGTTTTGTCTTTCATGTGGGTATGGTCAGGGGTTTTGACCAAGCTATTCGTGTACAAATACATGGGGTTTCGTGGTGAGCCTTTGGGTGAGATAGTGAAGATTGGTATCTCCATTGCGAACATGTTCTTATTTGCAATTCTGGCGAAAATTACGCGTGGTGGCTCCTTCAATCCACTCACTGTTCTGTCTAGTGCTATTTCTGGGGATTTCAGCAAATTTCTGTACTGTGTCAGTGCTAGAATTCCCACTCAGGTGATTGGATCTATTATTGGGGTTAGGCTTATTATTGATACCTTCCCTGAAGTCGGACGGGGACCGCGATTGAATATTGACATTCATCAAGGTGCACTGACAGAAGGATTACTGACATTTGCAATTGCTATCATCTCACTTGGTCTTGCCACAAAAATTCCTGAAAATTTCTTCATGAAGACTTGGATCTCTAGTGTCTCCAAGCTATCACTTCATATACTTGGCTCTGATCTCACTGGTGGTTGTATGAACCCAGCCTCTGTAATGGGGTGGGCTTATGCTCGAGGGGATCACATAACCAAGGAGCATCTTCTTGTATACTGGGTTGCCCCCATGAAAGCAACTGTGCTGGCAGTGTGGACATTCAAGTTGCTAGTTAGGCCTGTAAAAGAAGACAAATCAGTCTCAAAAAGTAAATCAGATTGA 711 0.436 MGRTSLLVSDFVLSFMWVWSGVLTKLFVYKYMGFRGEPLGEIVKIGISIANMFLFAILAKITRGGSFNPLTVLSSAISGDFSKFLYCVSARIPTQVIGSIIGVRLIIDTFPEVGRGPRLNIDIHQGALTEGLLTFAIAIISLGLATKIPENFFMKTWISSVSKLSLHILGSDLTGGCMNPASVMGWAYARGDHITKEHLLVYWVAPMKATVLAVWTFKLLVRPVKEDKSVSKSKSD 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0161 236 Gene3D Glycerol uptake facilitator protein. 4 234 IPR023271 -
Sto13g0161 236 PANTHER AQUAPORIN SIP2-1-RELATED 1 236 IPR044226 GO:0015267
Sto13g0161 236 SUPERFAMILY Aquaporin-like 7 228 IPR023271 -
Sto13g0161 236 Pfam Major intrinsic protein 7 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto13g0161 236 PANTHER AQUAPORIN SIP2-1-RELATED 1 236 - -
Sto13g0161 236 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto13g0161 236 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto13g0161 236 PRINTS Major intrinsic protein family signature 129 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto13g0161 236 PRINTS Major intrinsic protein family signature 160 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto13g0161 236 PRINTS Major intrinsic protein family signature 200 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0161 Sto-Chr13 1402176 1404765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0161 1 236 Major Intrinsic Protein MIP AT3G56950 60.759 2.68e-109 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0161 K09875 - gmx:100786138 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g0161 13 1402176 1404765 Sto13g0161 13 1402176 1404765 ECH