Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0156 ATGGAGCAAAGTATGGGTCAAGACTCTGTTCCTGCACATGGGTCCTTTGATAAGTCTAGAGTTTTGAATGTGAAGCCATTGAGAAGCCTTGTTCCTCTATTCCCTTCAACATCTAATGCTGCTCCATCTTCAAATGTTCAAGGTGGGGCTCCCTTTGTGTCGGTCTCTCCGTCCGGTCCTTTCCCTCCCGGCATTTCGCCGTTTTACCCTTTTTTCTTCTCTCCGGAGTCCCAAAGGCTGTCAGAACAAAACCTTCAGACCCCGGCTGGTGTCGCTGCTGTTCCAATTAATTCATTCAGGACACCTACACCAAGAGGAAGAAGTAATAGGGGATTCACGGAGGAAGATGGCTATAGTAATAGCCAGCAGGTCAATTTTGATGCAACTGAGACTGATACTGAAGAAGGAGGTAGGTTAAGGTCCCGGAAGAAGAAGGGAAAGGGAAGGCTGGGTTCTGGATCCGATGTTGATGTTGATGCAGTGGCTAATGATATTCTCAAATCGATCAATCCTGTAGTTTTTGATGTCTTAAATCAACCAGATGGAAGCAAAGACGCGGTTTCATATACACTCCTGATATATGAAGTGCTGAGAAGAAAGATCACGCAGATTGAAGATTTGAAAGAAGGGAATCCTGGAGTGGCGAGGCGGCCTGATTTGAGGGCAGGAACAATTATGTTGAGTAAAGGGGTTCGAACAAATAGTAAGAAACGGATCGGAGCTGCTCCCGGTGTTGAAGTCGgtgatattttctttttcaggaTGGAATTGTGTATTGTAGGATTACATTCACCATCCATGGCTGGAATTGATTACTTGGGTATCAAATTCAGTCAAGAAGAAGAGCCGTTGGCTGTAAGTATTGTCTCGTCCGGAGGATACGAAGATAATGCAGAAGATGGAGATGTGCTAATTTATAGTGGCCAAGGTGGGGCTAAGGGAGCAAGCGATCAAAAGCTCGAAAGGGGTAATCTTGCATTGGAAAAGAGTCTACACCGAGGTAACGAAGTGAGAGTAATTAGAGGTCTAAGGGACATAGCAACTCCGGGTGGGAAGATATATGTCTATGATGGCCTTTACAAGATTCAAGATTCATGGGTCGATAAAGCGAAGACGGGTTTCAATGTATTTAAGTACAAGTTAGTCAGATTGCCCGGGCAGCCCGAAGCATATACGACATGGAAATCCATTCTACAATGGTCTGAGAAGTCTACTTCAAGAGTCGGTACTATATTGCCTGATCTTACTTCCGGGGCAGAAAAATTGCCGGTTTGTCTCGTGAATGATGTTGATAATGAGAAGGGTCCTGCGTATTTCACATACAGCCCTACTCTCAAGAATTTGAAGCCGACAAATCCCTTAGATCCTTCTGCTGGGTGTAATTGTGTTGGTGGATGTCTTCCTGGAAACTATAATTGTTCTTGCATTCAAAAGAATGGAGGTCATCTCCCATACGCTCCAAATGGGGTGCTTTTGGACTTAAAATCTGTCATTTACGAGTGTGGTCCTTCCTGTCAGTGCCCTCCAAACTGCCGAAACAGAATTACTCAAGGCGGCTTGAAATTTCGTCTGGAGGTGTTCAAAACTAAGAATAAAGGCTGGGGACTACGATCATGGGACCCGATTCGTGCCGGAGCTTTTATATGCGAGTATGCAGGGGAAGTCATAGACAATGCTAGAATGGAGGAGCTCGGAGGCGAAAACGAAGATGATTATATCTTTGATTCAACCCGTATCTATCAGCAGCTGGAAATTTTTCCTAGTGAAACCGAAGCACCAAAGATCCCATATCCCCTTTATATAACAGCAAGAAATGATGGAAATGTTGCTCGGTTTATGAACCACAGTTGCTCTCCTAATGTATTTTGGCGCCCAGTGGTGCGTGAAAACAAAGGTGCATCCGATCTCCACATTGCTTTCCATGCTGTCAGGCACATCCCTCCTATGACCGAGTTGACGTATGATTATGGGATAGTTCTTCCTCTCAAAGCCGgccaaaggaaaaagaaatgctTATGCGGGTCGGCGAAATGTAGGGATTACTTTTGTTGA 2052 0.4415 MEQSMGQDSVPAHGSFDKSRVLNVKPLRSLVPLFPSTSNAAPSSNVQGGAPFVSVSPSGPFPPGISPFYPFFFSPESQRLSEQNLQTPAGVAAVPINSFRTPTPRGRSNRGFTEEDGYSNSQQVNFDATETDTEEGGRLRSRKKKGKGRLGSGSDVDVDAVANDILKSINPVVFDVLNQPDGSKDAVSYTLLIYEVLRRKITQIEDLKEGNPGVARRPDLRAGTIMLSKGVRTNSKKRIGAAPGVEVGDIFFFRMELCIVGLHSPSMAGIDYLGIKFSQEEEPLAVSIVSSGGYEDNAEDGDVLIYSGQGGAKGASDQKLERGNLALEKSLHRGNEVRVIRGLRDIATPGGKIYVYDGLYKIQDSWVDKAKTGFNVFKYKLVRLPGQPEAYTTWKSILQWSEKSTSRVGTILPDLTSGAEKLPVCLVNDVDNEKGPAYFTYSPTLKNLKPTNPLDPSAGCNCVGGCLPGNYNCSCIQKNGGHLPYAPNGVLLDLKSVIYECGPSCQCPPNCRNRITQGGLKFRLEVFKTKNKGWGLRSWDPIRAGAFICEYAGEVIDNARMEELGGENEDDYIFDSTRIYQQLEIFPSETEAPKIPYPLYITARNDGNVARFMNHSCSPNVFWRPVVRENKGASDLHIAFHAVRHIPPMTELTYDYGIVLPLKAGQRKKKCLCGSAKCRDYFC 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0156 683 ProSiteProfiles SET domain profile. 522 657 IPR001214 GO:0005515
Sto13g0156 683 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 22 682 IPR025794 GO:0016571
Sto13g0156 683 SMART preset_2 412 506 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Sto13g0156 683 MobiDBLite consensus disorder prediction 101 130 - -
Sto13g0156 683 ProSiteProfiles Pre-SET domain profile. 458 519 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Sto13g0156 683 SMART G9a_1 235 387 IPR003105 -
Sto13g0156 683 ProSiteProfiles Post-SET domain profile. 667 683 IPR003616 -
Sto13g0156 683 Pfam Pre-SET motif 416 514 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Sto13g0156 683 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 12 682 - -
Sto13g0156 683 SUPERFAMILY PUA domain-like 222 400 IPR015947 -
Sto13g0156 683 Gene3D SET domain 404 682 IPR046341 -
Sto13g0156 683 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 12 682 - -
Sto13g0156 683 SMART set_7 522 663 IPR001214 GO:0005515
Sto13g0156 683 Gene3D - 223 402 IPR036987 -
Sto13g0156 683 ProSiteProfiles YDG domain profile. 240 383 IPR003105 -
Sto13g0156 683 Pfam SAD/SRA domain 239 387 IPR003105 -
Sto13g0156 683 SUPERFAMILY SET domain 399 663 IPR046341 -
Sto13g0156 683 Pfam SET domain 533 657 IPR001214 GO:0005515
Sto13g0156 683 MobiDBLite consensus disorder prediction 96 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0156 Sto-Chr13 1371629 1373716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0156 1 682 Su(var)3-9 homologs AT1G73100 49.088 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sto13g0156 SAD_SRA 7.7e-48 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0156 K24405 - gmx:100786650 1005.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g0156 13 1371629 1373716 Sto13g0156 13 1371629 1373716 ECH