Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0114 TTGTTCAGGTCAAAGTCAAACCAGTACCCTAACACATCTCTAATCCAAATCGAGGGAGTGAACTCCAAGGAAGAGGTAGCATGGTATTGTGGCAAGAGAATGGCATATATCTACAAAGCCAAGGTTAAGAAGAATGGGAGTCATTATCGCTGCATTTGGGGTAAAGTTACCAGGGCCCATGGTAACAGCGGTATTGTTCGAGCTAAATTCAAGTCAAACTTGCCACCCAAATCAATGGGAGCTAGGGTCAGAGTATTCATGTATCCAAGCAATATATGA 279 0.4301 LFRSKSNQYPNTSLIQIEGVNSKEEVAWYCGKRMAYIYKAKVKKNGSHYRCIWGKVTRAHGNSGIVRAKFKSNLPPKSMGARVRVFMYPSNI 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0114 92 Pfam Ribosomal protein L35Ae 3 86 IPR001780 GO:0003735|GO:0005840|GO:0006412
Sto13g0114 92 SUPERFAMILY Translation proteins 3 86 IPR009000 -
Sto13g0114 92 Gene3D translation elongation factor selb, chain A, domain 4 2 92 IPR038661 -
Sto13g0114 92 PANTHER 60S RIBOSOMAL PROTEIN L35A 3 92 IPR001780 GO:0003735|GO:0005840|GO:0006412
Sto13g0114 92 ProSitePatterns Ribosomal protein L35Ae signature. 54 75 IPR018266 GO:0003735|GO:0005840|GO:0006412
Sto13g0114 92 PANTHER 60S RIBOSOMAL PROTEIN L35A-1 3 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0114 Sto-Chr13 972680 973042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0114 3 92 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 87.778 1.05e-57 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0114 K02917 - nnu:104593384 185.652