Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0074 ATGTTTCCGAGACTAATACAGCCTCACGAAGATAGAGTTGGGCAGGATGATCTGCAACTGCAAGGTGGTTCAAACCACAATCTCAACAAGGGAGACCCATGTTTGGTGTTGACGGCCGATCCCAAACCTCGTCTTCGTTGGACGCAGGACCTCCATGAACGATTTGTCGATGCTGTTACCCAACTTGGGGGTGCCAGTAGTGaGGGTCATGAAATTAAAGAGGCACTAAGAGCACAGATGGAAGTGCAAAGTAAACTACATTTGCAAGTGGAGGCAGAGAAGCGGTTGCAGATTCGCCAAAATGCAGAGAGGAGATATATGGCCATGCTCGAAAGAGCTTGCAAGATGCTAGCTGATCAGTTTATTGGTGCTACATTTATAGACACAAACAACCAAAAATTTCTAGGGCCTGGAAGTAAAGAACCAAGAGGTCCCTTGCTTGACCCTCCTCTTGGCATTTACGCCTTACCGTTTGCTGAGGTGACTAACATCACACAAGAATCCGGTAGGGCGGCCCAATGGCGAGGCGAAAAAGACGATGCTGAACTAGGTCTCCGTGGAAGCAGTAACACCTTTGATCTTTGTGGTCCAAGTACAATGGATCCAGTCAACGGAGAGAACAGTCTCAACAACAATCCTAATCTCTCCTCAAAGCAACGGTTACGCTGGACACATGAGCTCCATGAACGCTTTGTTGATGCTGTGACACAACTCGGTGGACCAGATCGTGAGTCTCCTTATCCTATACTTGGTGCCACACCTAAAGGTGTTCTCAGAGTGATGGGTGTACAAGGCTTAACTATATATCATGTCAAAAGCCACCTGCAGAAATATCGACTTGCTAAATACCTCCCTGATTCCTCATCTGATGGGAAAAAAGCTGACAAGAAAGAAACAGGGGATGCACTTTCCAACCTAGATGGTTCATCAGGGATGCAAATAACTGAGGCACTAAAGCTGCAAATGGAGGTGCAGAAGCGCTTACATGAGCAATTAGAGGTTCAGAGACAGCTACAACTACGGATTGAAGCCCAAGGTAAATACTTGAAGAAGATAATTGAAGAACAACAGCGGCTCAGTGGGGTTCTTTCAGAAGCACCTGGCTCGGGGGATGCAGCCTCAGTGCCTAGTGATGATACCTGCCAAGACCTTGACAATAAGACTGACCCGGCAACCCCGGCTCCCACCTCCGAGTGCCCCCTTCAGGAAAAAGCTGCTAAAGAACGCGCTCCGGCAAAGAGCCTTTCAATCGACGAATCCTTTTCATCTCACCATGAACCATTGACGCCGGATTCCGGATGCCAATTCGGTTCCCCTACAGACAGTCCTAAAGGGGAGAGATCGGCGAAAAAGCAACGGGTTAGCATGGATGGAGGAGCTTATTCTAAACAGGACATGGTGTTCCCACTTCAGATACTTGAGTCAAGCATGTCACATTGTGAGCCATTAAACGGTGTTTTCCCTACCCAGGAGCAGTTTGATCCTTCATTAGTTATGTCTACTAGAAGTAACGAGGAATTTGACAAGGTTGGTGGTAGCAATATGTGA 1548 0.4755 MFPRLIQPHEDRVGQDDLQLQGGSNHNLNKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASSEGHEIKEALRAQMEVQSKLHLQVEAEKRLQIRQNAERRYMAMLERACKMLADQFIGATFIDTNNQKFLGPGSKEPRGPLLDPPLGIYALPFAEVTNITQESGRAAQWRGEKDDAELGLRGSSNTFDLCGPSTMDPVNGENSLNNNPNLSSKQRLRWTHELHERFVDAVTQLGGPDRESPYPILGATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKADKKETGDALSNLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSEAPGSGDAASVPSDDTCQDLDNKTDPATPAPTSECPLQEKAAKERAPAKSLSIDESFSSHHEPLTPDSGCQFGSPTDSPKGERSAKKQRVSMDGGAYSKQDMVFPLQILESSMSHCEPLNGVFPTQEQFDPSLVMSTRSNEEFDKVGGSNM 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0074 515 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 67 108 IPR044848 GO:0003700
Sto13g0074 515 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 35 65 IPR044848 GO:0003700
Sto13g0074 515 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 195 507 IPR044848 GO:0003700
Sto13g0074 515 Coils Coil 315 335 - -
Sto13g0074 515 Pfam Myb-like DNA-binding domain 221 279 IPR001005 -
Sto13g0074 515 MobiDBLite consensus disorder prediction 285 308 - -
Sto13g0074 515 Pfam MYB-CC type transfactor, LHEQLE motif 71 116 IPR025756 -
Sto13g0074 515 Pfam MYB-CC type transfactor, LHEQLE motif 312 358 IPR025756 -
Sto13g0074 515 SUPERFAMILY Homeodomain-like 216 280 IPR009057 -
Sto13g0074 515 MobiDBLite consensus disorder prediction 286 302 - -
Sto13g0074 515 MobiDBLite consensus disorder prediction 416 442 - -
Sto13g0074 515 MobiDBLite consensus disorder prediction 375 395 - -
Sto13g0074 515 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 42 90 IPR006447 GO:0003677
Sto13g0074 515 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 218 281 IPR006447 GO:0003677
Sto13g0074 515 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 35 65 - -
Sto13g0074 515 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 67 108 - -
Sto13g0074 515 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 195 507 - -
Sto13g0074 515 MobiDBLite consensus disorder prediction 363 460 - -
Sto13g0074 515 Gene3D - 217 284 - -
Sto13g0074 515 Gene3D - 41 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0074 Sto-Chr13 600646 615104 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0074 261 515 G2-like Transcription Factor Family AT2G01060 62.692 1.88e-94 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto13g0074 Myb_DNA-binding 1.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0074 - - hbr:110654981 447.973