Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0059 ATGGAGGCCGATTGGGATCTCCACGCCGTAGTCAGAGGATGCGCCGCCACCACAGCCACCACCacaaccgccgccgccgccgccgtcaGTAGCAACAGCAGTACTACTACTACTCTCACTAGTGCCTCCTCCATCTCTTGTTCCTCCGGTGGTGCTACTTTTGGGTATCCCATGAATCCAATATTTGAAGCAAAGGGTTTGAAATTGAATTCCTCCATTGCAGAATTACATGAGCTTTGTAAGCCTAATTTCTTCTTCCCCAAATTTCACTTTCTTCCTAATAATTCCTTCCAACtttctccatcatcatcatcttcttcttcttcttcctcctctgcCCCCATATCTTCTGAAATTACACAAACACCCCATCTTCCTACTAATAATAAGCACTCATCCCATGCTGCTTCTCTCACCGCCCCAAGATCCAAAAGAAGGAAGAACCAGCTGAAGAGAGTGTGTCATGTTCCAGCTGAAGCTGTCTCTTCAGACATTTGGGCATGGCGGAAATATGGACAGAAACCCATTAAAGGGTCGCCATATCCAAGATGCAGCAGTTCAAAAGCGTGCTTGGCCCGAAAACAAGTGGAGCGGAACAGATCCGACCCGACTATGTTCATAGTGACATATACGGCAGATCACAACCACCCCGCTCCGACCCATCGAAACTCTCTTGCCGGGTCGACCCGACAGAAGCCCGTGACGCCGGCCGCCTCCGGAGACGGAGATCCGATGAAAACCGTATCTCCGGCGACCTCCGGGGGGGATGAGGAGCTCGCATCTGAGGGCACAACGAGATCGGAGAgcaaagaagaggaggaggaggaagaaaacGGGTTCGGGTTGTCGGATATGGAGCTAACGGATGATTTCTTCGAGGGTTTAGATGAACTGACAGGTTCCCCGGTGACGGCGCCGCCTAATGCGGTGGCCGGAGAATGCATAATGACAGCCGAATTTCCTGCTTTGGGTAGCTAA 978 0.4622 MEADWDLHAVVRGCAATTATTTTAAAAAVSSNSSTTTTLTSASSISCSSGGATFGYPMNPIFEAKGLKLNSSIAELHELCKPNFFFPKFHFLPNNSFQLSPSSSSSSSSSSSAPISSEITQTPHLPTNNKHSSHAASLTAPRSKRRKNQLKRVCHVPAEAVSSDIWAWRKYGQKPIKGSPYPRCSSSKACLARKQVERNRSDPTMFIVTYTADHNHPAPTHRNSLAGSTRQKPVTPAASGDGDPMKTVSPATSGGDEELASEGTTRSESKEEEEEEENGFGLSDMELTDDFFEGLDELTGSPVTAPPNAVAGECIMTAEFPALGS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0059 325 MobiDBLite consensus disorder prediction 213 287 - -
Sto13g0059 325 ProSiteProfiles WRKY domain profile. 157 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g0059 325 MobiDBLite consensus disorder prediction 216 235 - -
Sto13g0059 325 MobiDBLite consensus disorder prediction 102 139 - -
Sto13g0059 325 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 303 - -
Sto13g0059 325 SUPERFAMILY WRKY DNA-binding domain 159 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto13g0059 325 MobiDBLite consensus disorder prediction 269 287 - -
Sto13g0059 325 Pfam WRKY DNA -binding domain 164 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g0059 325 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 303 IPR044810 GO:0003700
Sto13g0059 325 Gene3D WRKY domain 146 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto13g0059 325 SMART WRKY_cls 162 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g0059 325 MobiDBLite consensus disorder prediction 102 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0059 Sto-Chr13 443615 445119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0059 1 298 WRKY Transcription Factor Family AT4G01250 44.201 2.76e-69 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto13g0059 WRKY 1.7e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0059 K13425 - gmx:100798084 270.781