Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0056 ATGTCGTCGTCGCCGGCGCCGCCACAGGATCTCTTGGAGTACTTCGATCAGAATATTGATTGGACGAGAAGTGCAGATGATGTTCTGGACGACGGCTATCGTTGGAGGAAATATGGACAGAAAGCTGTCAAGAACAGTATATATCCCAGaCGCCCCAAACGCAACCCTTCTATCTCTAGAATTCCATCTTTGAGACTCAAGCCCAATCGGAATTATCCCTGTGTCAGAGCCTCCGCCGCCGGAGGAGCCTCCGTCGCTCCAGCTCCGGCGGCTCAGCCATGGCAGGGCGCTGCTCTAAAACCTCTATTAGCTTCCATATCGACGGGGGTTATACTCTGGTTCCTCCCCGTTCCTTCTGGTGTATCCAAAATCGCGTGGCAACTGCTTGCAATTTTCTTAGCCACAATCATCGGCATCATCACGCAGCCATTACCGCTCGGTGCTGTGGCTGTAATAGGTTTGGGCGTTTCGGTTCTCACGAAAACCCTAACATTCGCCGCAGCATTTTCCGGCTTCGGCGACCCAATCCCGTGGCTCATTTGCCTGGCATTCTTCTTCGCCCGAGGATTCATCAAGACCGGTCTAGGAAACCGAATCGCTTACCAATTCGTATCTCTTTTTGGTAGCTCATCTCTAGGGTTAGGGTATAGTTTAGTTTTCAGCGAGGCCTTGTTGGCACCGGCGATTCCTTCCGTTTCAGCGAGAGCGGGTGGAATTTTCCTTCCGCTAGTGAAATCCTTATCCGTAGCTTGTGGTAGCAACGTGGGCGACGGAACCGAGAATCGATTAGGGTCGTGGCTAATGCTGACTTGCTTTCAAACTTCGGTGATTTCGTCGGCGATGTTTCTGACGGGAATGGCGGCGAATCCACTGTGTGCAACATTGACTCAAAGCTCGATTAATCAGACGATAGGGTGGTTAGATTGGGCGAAAGCGGCGTTTGTTCCTGGATTGATATCGTTGATCTTGGTGCCTTtcattttgtatgtgatttacccGCCAACTGTGAAATCGAGTCCTGATGCACCGAAGCTTGCGAGGGAGAAGTTGCAGAAAATGGGACCCATGACTGCAAATGAGAAGATCATGGCTGGAACTTTGCTTGTTACGGTGGGGCTGTGGGTTTTTGGAGGGGTTCTTAATATAGATGCTGTGAGCGCTGCAATTCTGGGGTTAGCCATACTGCTTGTGACAGGAGTTATTACATGGAAGGAGTGCTTAGCTGAGGGAGTTGCTTGGGATACTCTCACTTGGTTCGCTGCCCTCATTGCTATGGCTGGTTATCTCAACAAATACGGTCTCATTTCTTGGTTCAGCCAATCTGTTGTCAAGTTTGTTGGTGGATTGGGTCTATCATGGCAGCTATCTTTTGGCATCTTGGTCCTTCTCTACTTCTACTCACATTACTTCTTTGCAAGTGGAGCTGCTCATATAGGTGCTATGTTCACAGCCTTCATATCAGTAGCTAGTGCTTTGGGCACTCCACCATATTTTGCAGCCTTGGTTCTGTCCTTCCTCTCCAACATCATGGGAGGGCTTACCCACTATGGGATTGGCTCTGCCCCTGTATTTTATGGTGCCAACTATGTTCCTCTTGCTCAATGGTGGGGCTATGGCTTCATTATAAGTGTTGTTAACATCATTATCTGGCTTGGAATTGGAGGAGTTTGGTGGAAAGTCATTGGCTTGTGGTGA 1695 0.4891 MSSSPAPPQDLLEYFDQNIDWTRSADDVLDDGYRWRKYGQKAVKNSIYPRRPKRNPSISRIPSLRLKPNRNYPCVRASAAGGASVAPAPAAQPWQGAALKPLLASISTGVILWFLPVPSGVSKIAWQLLAIFLATIIGIITQPLPLGAVAVIGLGVSVLTKTLTFAAAFSGFGDPIPWLICLAFFFARGFIKTGLGNRIAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLSVACGSNVGDGTENRLGSWLMLTCFQTSVISSAMFLTGMAANPLCATLTQSSINQTIGWLDWAKAAFVPGLISLILVPFILYVIYPPTVKSSPDAPKLAREKLQKMGPMTANEKIMAGTLLVTVGLWVFGGVLNIDAVSAAILGLAILLVTGVITWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQSVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFISVASALGTPPYFAALVLSFLSNIMGGLTHYGIGSAPVFYGANYVPLAQWWGYGFIISVVNIIIWLGIGGVWWKVIGLW 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0056 564 Pfam Sodium:sulfate symporter transmembrane region 101 564 IPR001898 GO:0016020|GO:0022857|GO:0055085
Sto13g0056 564 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 71 564 IPR030676 -
Sto13g0056 564 SMART WRKY_cls 29 63 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g0056 564 CDD ArsB_NhaD_permease 136 558 - -
Sto13g0056 564 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 71 564 - -
Sto13g0056 564 ProSiteProfiles WRKY domain profile. 24 89 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g0056 564 Gene3D WRKY domain 19 63 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto13g0056 564 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 116 558 IPR001898 GO:0016020|GO:0022857|GO:0055085
Sto13g0056 564 SUPERFAMILY WRKY DNA-binding domain 23 50 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto13g0056 564 Pfam WRKY DNA -binding domain 30 50 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0056 Sto-Chr13 414617 421230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0056 89 563 Antiporters AT5G12860 85.474 0.0 819
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto13g0056 Na_sulph_symp 2.9e-141 CL0182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0056 - - bhj:120088316 825.854