Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0042 ATGAGCCATAGCCATAGCCATGATGATACGACCACGGGCGACAATCACGAGCAGGACACGGTGATGCCGGGTTTTCGGTTCCACCCGACGGAAGAAGAGCTCGTGGAGTTCTACCTTCGGCGGAAAGTAGAAGGAAAGCGCTTCAACGTTGAGCTCATCACTTTCCTCGATCTCTATCGATACGACCCATGGGAGCTTCcagctatggCAGCAATTGGGGAGAAGGAATGGTACTTCTATGTGCCAAGAGATAGGAAGTATAGGAATGGAGATCGGCCAAATAGAGTGACGAGTTCAGGGTATTGGAAAGCGACGGGAGCTGATAGAATGATAAGAACAGAAAGTGGAAGATCCATTGGGTTGAAGAAAACCCTAGTCTTCTATTCTGGCAAAGCCCCTAAAGGCATCAGAACTAGTTGGATTATGAATGAGTATCGCTTGCCTCATCATGACACTCTACGCTTTCAAAAGATTCTGGGAATGGACTTCCATGCCTCACCCAACAACCCGAGAATTCAGCAATATGTCCTTCAAGTAATACAGAGACATCCATAA 555 0.4649 MSHSHSHDDTTTGDNHEQDTVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWYFYVPRDRKYRNGDRPNRVTSSGYWKATGADRMIRTESGRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPHHDTLRFQKILGMDFHASPNNPRIQQYVLQVIQRHP 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0042 184 MobiDBLite consensus disorder prediction 1 15 - -
Sto13g0042 184 SUPERFAMILY NAC domain 17 153 IPR036093 GO:0003677|GO:0006355
Sto13g0042 184 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 153 - -
Sto13g0042 184 Pfam No apical meristem (NAM) protein 23 147 IPR003441 GO:0003677|GO:0006355
Sto13g0042 184 PANTHER OS01G0888300 PROTEIN 4 153 - -
Sto13g0042 184 MobiDBLite consensus disorder prediction 1 23 - -
Sto13g0042 184 ProSiteProfiles NAC domain profile. 21 183 IPR003441 GO:0003677|GO:0006355
Sto13g0042 184 Gene3D NAC domain 30 184 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0042 Sto-Chr13 304789 306782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0042 21 157 NAC Transcription Factor Family AT2G02450 91.971 7.08e-94 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto13g0042 NAM 1e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0042 - - gmx:100812779 295.819