Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0038 CTGTTTTCATCTTCCATCTCTCAAGCTCTTGAACCCTTCCCATCGCCGATCATCAACGCCACTGTCGCTCAACGTCACCGACGCACCTCCTACTACCGGTCATCAACGCCGCTGCACCTCCTACTGCCGGTCATCAACGCCGCTGCACCTGCCGCACGTCGTTCATCGTCAGTCACCGTCATCGCGGTTACTTTGATGGATGCACAAATCTCAACTAGTTCAAATTTGTTAGACAACAAAATTTCAGCTGAACCCTCATTCGAAAATGAAGTCACGGAATCAGATTTAACTCCATATGTTGGCATGGAATTTGAGACTGAAGAACATGCATATAGATTTTATAATGCATATGCTGGCTTCATTGGATTTAGCGTTAGAAAGCATTGGACAAATAAAAGTAGGGTGGATCAAATTACAATATTATCTCAAAAATTTGTATGTTTCAAAGAAGGGTTCAAGAAGAAACGTGATTGTGAAGCAAAGAGAGTTCATAAAGATATCAGAACCGGATGTTTGGCTCAAATGATCGTTGGTCGACAACCAAATGGAAAATATGTGGTTACATATTTTGAGAAGCAACATAATCATGCTTTGGCCACCCCTAGAAGCAGACACAAATTACCATCACAGAGAAAACTTTCTGCTGCTCAGGCCACTCAAATTGAATTGGCAAATCAGTCTGGCATtcgacaaaaattaatttttgaattcatGAGTCGACAGGTTGGAGGACGAGAGAATGTTGGATGTACTCTTAAGGATGTTAGTAATCATTTGAGTTCTAAGAGGACGAAAGAAATGAAGGAAGGAGAGGCCTACACTTTGCTTCATTATTTTCAGTCAAGACAGTCTGAGAACCCATCATTTTTTTATGACATTCAACTTGATGCTGAAGATCAAATCACAAATATTTTTTGGGCAGATGCAGAGATGGTTGTAGATTATGTTTGTTTCGGAGATGTGGTATCTTTTGATACTACTTATCGTACCAACAAAAATTGTCGACCCTTTGCACCCTTTGTTGGATTTAATCACCATCGACAAACTGTCATATTTGGTGCAGCACTATTGTATGATGAAACTGCTGAATCATTTGAATGGTTGTTTAAGACTTTTCTTAAGGCCATGTGTGGGAAGAAGCCAAAAACAATTTTTACAGATCAAGATGCTGCAATGGCAAAAGCAATTTCAATGGTTTTACCTGATTCTTATCATCGCTTATGCACTTGGCATTTATTTCAAAATGCTCTCAAGAATGTCAATCATGCCTTTAAGAAGTCAGATTCTTTCGCTTCAGACTTGAGATGTTGTATTTATGACTACGAGTATGAAGATGAATTTTTGAATGCTTGGGAGTCAATACTTGATAAGCACGACCTTCGTCAAAATAAGTGGATGCAAGATTTatttcaaaagaaagaaaaatgggcTTCAGTGTATGGGCGACATACTTTTTCAGCAGGTGCTACATCAACACAACTAAGTGAAAGTTTCAATGGTCGACTAAGAGATATCCTTTTACTTAAGAGTGCAAGAAATATCTACACACCAACAATCTATCATCAAGTTTTGGAGGAATATGAGAAGTCTTGTAACATGATTTTCAAGGAATATAATCAAGTTTCAACATTGTTTGGGTATAAAGTGTGCCTATTGGATCATCCGAGAGAGCACAATGTTACTTTTAACTCAGAAGATGAGACAGTTGTGTGTAGCtgcaaaaaatttgaatttattggAATCTTGTGTGGCCATGCTCTTCACGTGCTTCATCATTGGaataaaatagttattcctGAAAAATACATTCTCAAGAGGTGGACCAAAAATGCTCGAAGTGGATGTGTTATGGATAACAATGGACGCATAATTAAGGAAGATCCTAATTTGGCTGTCTCGAATCGTTTTAAAGACTTGTCTCGAAATGCAGTTCAGATAGCAAGTAAAGCTGCTAAATCTGATGATGCTTTAaagtttttttccaaaaaattgGTTGAATtaagtatgaaaattgataaaattttgaCTTCAGTTTATTCTAGTGATCATCATGAACAAGGGGAAGAGACCAAtgcaattgaaaaaaatgtcaTACAAGTCAAGGGAATGAAGAAAAAGGATGGGTTGTCTCGTGTTAAAGGTCGACCAAAAAGTTGTGTTGAAAAGCCAAAAAAGAAACGCTGCTCACAAGTGTTAACTCCTTCAAGTGAACTTGTTTACCATGTCCCTACTTCAGCTGTAGTTTCACAGgaatatttgttttgttttgtctaa 2274 0.3597 LFSSSISQALEPFPSPIINATVAQRHRRTSYYRSSTPLHLLLPVINAAAPAARRSSSVTVIAVTLMDAQISTSSNLLDNKISAEPSFENEVTESDLTPYVGMEFETEEHAYRFYNAYAGFIGFSVRKHWTNKSRVDQITILSQKFVCFKEGFKKKRDCEAKRVHKDIRTGCLAQMIVGRQPNGKYVVTYFEKQHNHALATPRSRHKLPSQRKLSAAQATQIELANQSGIRQKLIFEFMSRQVGGRENVGCTLKDVSNHLSSKRTKEMKEGEAYTLLHYFQSRQSENPSFFYDIQLDAEDQITNIFWADAEMVVDYVCFGDVVSFDTTYRTNKNCRPFAPFVGFNHHRQTVIFGAALLYDETAESFEWLFKTFLKAMCGKKPKTIFTDQDAAMAKAISMVLPDSYHRLCTWHLFQNALKNVNHAFKKSDSFASDLRCCIYDYEYEDEFLNAWESILDKHDLRQNKWMQDLFQKKEKWASVYGRHTFSAGATSTQLSESFNGRLRDILLLKSARNIYTPTIYHQVLEEYEKSCNMIFKEYNQVSTLFGYKVCLLDHPREHNVTFNSEDETVVCSCKKFEFIGILCGHALHVLHHWNKIVIPEKYILKRWTKNARSGCVMDNNGRIIKEDPNLAVSNRFKDLSRNAVQIASKAAKSDDALKFFSKKLVELSMKIDKILTSVYSSDHHEQGEETNAIEKNVIQVKGMKKKDGLSRVKGRPKSCVEKPKKKRCSQVLTPSSELVYHVPTSAVVSQEYLFCFV 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0038 757 ProSiteProfiles Zinc finger SWIM-type profile. 558 594 IPR007527 GO:0008270
Sto13g0038 757 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 504 704 - -
Sto13g0038 757 SMART 26again6 569 596 IPR006564 GO:0008270
Sto13g0038 757 Pfam MULE transposase domain 321 415 IPR018289 -
Sto13g0038 757 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 504 704 IPR031052 GO:0006355
Sto13g0038 757 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 70 493 - -
Sto13g0038 757 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 70 493 IPR031052 GO:0006355
Sto13g0038 757 Pfam SWIM zinc finger 571 593 IPR007527 GO:0008270
Sto13g0038 757 Pfam FAR1 DNA-binding domain 112 199 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0038 Sto-Chr13 284596 287442 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto13g0038 MULE 8.8e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0038 - K17604 qsu:112016759 801.201