Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0037 ATGTCagaaatgcgggtttctgatcTCCACTTGAAGAAGGAGCTCACTCAAATTCGTAAAGCTGCTCGTGTATTGAGGGATCCTGGCACTACATCTTCCTGGAAGTCCCCACTTAGTTCCTCAAGATCTGTGGCtcctgcttctgcttctgcttcggCATGGAAGAATAATAATGGTAACTCTCAGCAACCTCTTCATTCTCAGTTCTCGCTCCCTAATGGAttcaacaacaatgggaaggACAAGATGGTGTTCCTGTGCAATTGGAAGAATTACAAATCATCAAGCGAGAAACACAATGGCGATGataaggaggaggaagaagaagcattTGATGAAGATGGATCTTCGTCCCTTCTGGGGAGTTTCGAGGATAGCCTTAGTGATGCTCGCAATGGTTGTGATTCCAAGAGCGATACTTActtgggtggtggtggtgctgCTGGGATTGGTTCTTCCATTTTCAGATGTAAAGATGCGAATCTAGTTTCTCTGGCCACACCTTCAGCCAGAAGAGCTTTGGGGATTAAGAAAAAGAGTAAGAAAACCAATAATAATACCCATTTGGATATTCTAAGAAAATATCAGCAAAGAGAAATCAATGTTGGTGGTAAAAATTTAGTAAATCCCAAGCATCGATCAATGGTTTATAATAGCAGGGAGGATTCAGTTGAGCAGTCTGATGATACTGAAGATTACTGTAATTCTGAGGATTTAACAAGATTTTCAGGTGGGCCATCTCCTTTGCTTATGAAACTAAAGCATAAGAATTGGTCTCGCTCTTCTTCTAAGTTCTTGAGAAATAGCAGAAAAGAGGACTCCTCATATAGTACTCCTGCAATGTCTACTAGCTCCTATAATAGGTATGGTCACCATAATCCCAGTACTGTTGGATCATGGGATGGCACCACAACCTCAGtgaatgatggtgatgatgaggtAGATGATCCTTTGGATTTGCCGGGCCGCCAGGGATGTGGTATTCCTTGCTATTGGTCCAAGAAGACTCCAAAACATAGAGGCATGTGTGGGGGCTGTTATTCTCCTTCACTTTCGGATACTTTAAGGAGGAAAGGAAGTAGCATACTCTGTGGAAGTCAGACTATGTATCCTAGACACAGGCGAGCCTTATCAAGCTCTAACAAGCGGAGAATTTCCTCAAGGAGTGCTCAAGGTGTTCTCCCATTGCTCACCAATAGTGATGATATCAGAGGAGGGTCATCTCTAGGAACTGGAAGGAGTGATGATGAACTTTCTACAAACTTTGGGGAGCTTGATCTTGAGGGTATAAGCAGGTTGGATGGAAGAAGGTGGTCATCAAGTTGTAGGAGTCAAGAAGGATTGGAGATTGTGGCTTTCAATAGAGAAGgagaaggggaagaggaaggcACGCCAGAAAATACTAGGAGTTTCAGTCAGAAGTACAAACCTATGTTCTTTAGTGAGCTGATTGGGCAGAATATTGTGGTCCAGTCTCTTATAAATGCTATTTCGAGGGGTCGAATTGCTCCTGTCTACCTTTTCCAAGGACCACGTGGGACTGGTAAAACATCAACAGCCAGGATTTTTGCTGGTGCATTGAATTGTATAGCTCCCAATGAAAGTAAGCCTTGTGGCTACTGCAGGGAATGTACTGATTTCATTTCTGGCAAGAGCAGGGATCTTATGGAAGTTGATGGAACCAATAAGAAAGGGGTTGATAGAGTTAGATATCTACTGAAAAGATTATCAATGGGTCCTTCGTCCGCCTCCTCACGATACATGGTCTTTGTTATTGATGAGTGCCATTTGTTACCCTCTAAGACATGGCTGGCATTTCTTAAGTTTCTGGAAGATCCACCTCAGCGAGTTGTTTTCATATTTATAACAACCGATCTTGACAATGTTCCCCGAACAATACAATCTAGATGCCAGAAATACCTTTTCAACAAAATTAAAGATGCAGATATTGTGGCCCGGCTGAGAAAGATATCCACTGAGGAGAACCTGGATGTTGAAACAGATGCATTGGATCTTATTGCTATGAATGCAGATGGCTCACTTCGCGATGCAGAAACTATGTTGGAACAGCTAAGTTTGCTGGGAAAAAGAGTTACCACTTCTCTTGTCAATGAACTTGTGGGTGTTGTTTCAGATGAAAAATTACTGGAACTTTTGGAGTTAGCAATGTCATCAGACACTGCAGAAACAGTTAAAAGGGCCAGAGAATTGATGGACTCTGGAGTTGATCCCATTGTTTTGATGTCCCAATTGGCTAGCCTCATTATGGACATCATTGCTGGATCATATACCGTCATAGAAGACAAACCTGGTGATTCAGTCTTTGGTGGACGAAGTTTGAATGAATCAGAATTGGAGAGATTAAAGCATGCTTTAAAGCTTCTCTCAGAGGCCGAGAAACAGTTAAGAACTTCTAGTGAACGCTCAACATGGTTCACAGCTACTCTGTTACAGCTTGGTTCAATGCCATCTCCAGATCTTACTCAGTCTGTCAGCAGTAGGAGGCAGAGCAGCAAGACAACTGATGATGACCCATCAAGTGCTTCAAGAGAAGTAACTGTTCACAAGCACAAGTCAGATGCTCAATATATGTCACGGAAGTCAACATCACCTGCATCCATGCAAAAAGCTGTAAATAGTAATCCCGGACATCAAAGGGAGTTATCATCAAAGTTTGATGGTCTCAGCTTGAATTCAAAGCCATCAAATAGCCCAATCATAGATGCTGATGCCACACCTGTCTCACGTGGTGATCCAGTTAGTAATGTGATGTTTAGATGCATAGATTCAGGAAAGTTATATGATATCTGGGCACGTTGTATTGAGAGGTGTCACTCAAAGACGTTGAGGCAGCTGCTACATAATCATGGAAAGCTTGTATCCATATGTGAAGTTGATGGTCTTCTGGTTGCATATGTCATATTTGAGGATGGTGATATTAAACATAGGGCTGAAAGGTTTCTGAGCAGCATTACTAACTCCATGGAAATGGTTCTTAGACGTAATGTAGAGGTCAGAATTATCCACTTGGCTGATGGTGAAGGTGTAGGTCGGATCAATTCGCCGGGCTCAAAGCAGGCAGAGTCAATAATAGCAAGTGGTAAGGGACATAGAGGAGGTGGTCATGCAAAAGGAAGAGATGCTTATTCTGATTATCCTCCTTTTCTGGATGGAAACTTCCCATCTACTACTGATTCATCCGATTTACTGGCTGAAGGAAACGGGGTAAGAGAGAGGAGACCAGATATTCCTATGCAGAGGATTGAATCCATTATTCGTGAGCAGAGGCTGGAAACTGCTTGGTTACAGGCTGTAGAAAAAGGTTCTCCTGGATCGTTAAGTCGTTTGAGACCTGAGAAGAATCAGGTCCTGCCTCAGGAAGGTATCTACTGTAAGGACCCAACAGAATCCATGGATTCAACAAGGTTTTCCTCTCAGCACTGGGAAGATGACATCAATGGCGAAGTCAAagttttgaaagttaaaaatgcGAGGGTCCAACAGAAGGATCAGATCGGAAGGAGGGTTGATTGTTATCCTATGTCCCCTAGTTTACTGCATGATAGCAGTTTGGCAACAAACTCCATCAAAGACAGTCTGGGATATGAATCAAGCTCAGGAGCTAGAGGTTGTAGTGGATTTTTATGCTGGAACCACTCCAAGCGTAGAAGGGTAATAAAGGTAAAAGGTACCCCAGTTGGAGGCAGGAAAGTTGGACGCTTTTCATTGTTTGGTGAGTGTGGCAAGTCAAAGAAGAAGAGTTGA 3765 0.4088 MSEMRVSDLHLKKELTQIRKAARVLRDPGTTSSWKSPLSSSRSVAPASASASAWKNNNGNSQQPLHSQFSLPNGFNNNGKDKMVFLCNWKNYKSSSEKHNGDDKEEEEEAFDEDGSSSLLGSFEDSLSDARNGCDSKSDTYLGGGGAAGIGSSIFRCKDANLVSLATPSARRALGIKKKSKKTNNNTHLDILRKYQQREINVGGKNLVNPKHRSMVYNSREDSVEQSDDTEDYCNSEDLTRFSGGPSPLLMKLKHKNWSRSSSKFLRNSRKEDSSYSTPAMSTSSYNRYGHHNPSTVGSWDGTTTSVNDGDDEVDDPLDLPGRQGCGIPCYWSKKTPKHRGMCGGCYSPSLSDTLRRKGSSILCGSQTMYPRHRRALSSSNKRRISSRSAQGVLPLLTNSDDIRGGSSLGTGRSDDELSTNFGELDLEGISRLDGRRWSSSCRSQEGLEIVAFNREGEGEEEGTPENTRSFSQKYKPMFFSELIGQNIVVQSLINAISRGRIAPVYLFQGPRGTGKTSTARIFAGALNCIAPNESKPCGYCRECTDFISGKSRDLMEVDGTNKKGVDRVRYLLKRLSMGPSSASSRYMVFVIDECHLLPSKTWLAFLKFLEDPPQRVVFIFITTDLDNVPRTIQSRCQKYLFNKIKDADIVARLRKISTEENLDVETDALDLIAMNADGSLRDAETMLEQLSLLGKRVTTSLVNELVGVVSDEKLLELLELAMSSDTAETVKRARELMDSGVDPIVLMSQLASLIMDIIAGSYTVIEDKPGDSVFGGRSLNESELERLKHALKLLSEAEKQLRTSSERSTWFTATLLQLGSMPSPDLTQSVSSRRQSSKTTDDDPSSASREVTVHKHKSDAQYMSRKSTSPASMQKAVNSNPGHQRELSSKFDGLSLNSKPSNSPIIDADATPVSRGDPVSNVMFRCIDSGKLYDIWARCIERCHSKTLRQLLHNHGKLVSICEVDGLLVAYVIFEDGDIKHRAERFLSSITNSMEMVLRRNVEVRIIHLADGEGVGRINSPGSKQAESIIASGKGHRGGGHAKGRDAYSDYPPFLDGNFPSTTDSSDLLAEGNGVRERRPDIPMQRIESIIREQRLETAWLQAVEKGSPGSLSRLRPEKNQVLPQEGIYCKDPTESMDSTRFSSQHWEDDINGEVKVLKVKNARVQQKDQIGRRVDCYPMSPSLLHDSSLATNSIKDSLGYESSSGARGCSGFLCWNHSKRRRVIKVKGTPVGGRKVGRFSLFGECGKSKKKS 1254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0037 1254 MobiDBLite consensus disorder prediction 261 319 - -
Sto13g0037 1254 PANTHER PROTEIN STICHEL-LIKE 1 196 1195 - -
Sto13g0037 1254 Gene3D - 462 643 IPR027417 -
Sto13g0037 1254 MobiDBLite consensus disorder prediction 95 118 - -
Sto13g0037 1254 SMART AAA_5 502 664 IPR003593 -
Sto13g0037 1254 MobiDBLite consensus disorder prediction 864 895 - -
Sto13g0037 1254 MobiDBLite consensus disorder prediction 823 895 - -
Sto13g0037 1254 MobiDBLite consensus disorder prediction 272 307 - -
Sto13g0037 1254 Pfam DNA polymerase III subunits gamma and tau domain III 698 812 IPR022754 GO:0003887
Sto13g0037 1254 TIGRFAM dnaX_nterm: DNA polymerase III, subunit gamma and tau 470 819 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Sto13g0037 1254 CDD HLD_clamp_pol_III_gamma_tau 645 708 IPR045085 -
Sto13g0037 1254 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 196 1195 - -
Sto13g0037 1254 MobiDBLite consensus disorder prediction 29 73 - -
Sto13g0037 1254 Pfam DNA polymerase III, delta subunit 485 645 - -
Sto13g0037 1254 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 494 692 IPR027417 -
Sto13g0037 1254 MobiDBLite consensus disorder prediction 396 417 - -
Sto13g0037 1254 Gene3D - 646 708 - -
Sto13g0037 1254 MobiDBLite consensus disorder prediction 21 73 - -
Sto13g0037 1254 CDD AAA 484 642 - -
Sto13g0037 1254 Gene3D - 709 823 - -
Sto13g0037 1254 SUPERFAMILY post-AAA+ oligomerization domain-like 716 817 IPR008921 GO:0003677|GO:0006260
Sto13g0037 1254 MobiDBLite consensus disorder prediction 837 863 - -
Sto13g0037 1254 Coils Coil 781 808 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0037 Sto-Chr13 274496 280718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0037 466 768 Core DNA Replication Machinery Family AT1G21690 23.077 1.84e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0037 - - gmx:100814391 1760.35