Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0029 aTGAAGTTGGATACTTGTAATGGAAACATCGAAGCTTCCCAATCCCCTCCCACCGGGGACGATGCTGAGAGGGAAGGGGAAGAGATATTCGTGCCTCCTCTCAACTTCGCTATGGTCGATAATGGCATTTTCAGGTCTGGTTTTCCTGAGGCTGCCAACTTCGGATTCTTGAAATCCCTTCGCCTCCGCTCCGTTATATATTTGTGCCCTGAACCTTACCCAGAGGCGAATTCTGAATTCCTTAAGGCTAATGGGATAAGGCTTTATCAATTTGGGATCGATGGCTGTAAGGAACCTTTTGTAAACATCCCGGACGATACAATACGTGAAGCATTGAAAGTAGTCCTTGATGTTAGGAACCACCCTGTGCTAATTCATTGCAAACGAGGAAAGCATCGCACTGGTTGTCTTGTGGGATGCTTAAGGAGGATGCAGAGATGGTGTCTTTCATCTATTTTTGATGAGTACCAGAGGTTTGCTGCTGCCAAAGCCAGAGTGTCTGATCAGAGGTTCATAGAATTGTTTGACATATCTACTTTTAAGAACAACCCCATGTCATTTTCATGCTCAAGGAAATAG 579 0.4491 MKLDTCNGNIEASQSPPTGDDAEREGEEIFVPPLNFAMVDNGIFRSGFPEAANFGFLKSLRLRSVIYLCPEPYPEANSEFLKANGIRLYQFGIDGCKEPFVNIPDDTIREALKVVLDVRNHPVLIHCKRGKHRTGCLVGCLRRMQRWCLSSIFDEYQRFAAAKARVSDQRFIELFDISTFKNNPMSFSCSRK 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0029 192 MobiDBLite consensus disorder prediction 1 24 - -
Sto13g0029 192 PRINTS Plant and fungal dual specificity phosphatase signature 30 47 IPR020428 GO:0016791
Sto13g0029 192 PRINTS Plant and fungal dual specificity phosphatase signature 67 80 IPR020428 GO:0016791
Sto13g0029 192 PRINTS Plant and fungal dual specificity phosphatase signature 86 100 IPR020428 GO:0016791
Sto13g0029 192 PRINTS Plant and fungal dual specificity phosphatase signature 103 117 IPR020428 GO:0016791
Sto13g0029 192 Gene3D Protein tyrosine phosphatase superfamily 29 179 IPR029021 -
Sto13g0029 192 Pfam Tyrosine phosphatase family 31 184 IPR004861 -
Sto13g0029 192 PANTHER TYROSINE-PROTEIN PHOSPHATASE 14 191 - -
Sto13g0029 192 ProSiteProfiles Dual specificity protein phosphatase domain profile. 35 186 IPR020422 GO:0006470|GO:0008138
Sto13g0029 192 MobiDBLite consensus disorder prediction 1 16 - -
Sto13g0029 192 ProSitePatterns Tyrosine specific protein phosphatases active site. 125 135 IPR016130 GO:0016311|GO:0016791
Sto13g0029 192 PANTHER - 14 191 - -
Sto13g0029 192 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 30 177 IPR029021 -
Sto13g0029 192 CDD PFA-DSP_Siw14 30 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0029 Sto-Chr13 205493 209414 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0029 1 192 Protein tyrosine phosphatase (PTP) family AT4G03960 69.588 7.37e-103 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0029 K18045 - gmx:100785520 327.02