Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0023 ATGGCGTCACGTCCGGGTCGGACCCGGGTGGGGAAGTACGAGTTGGGTCGGACGCTAGGGGAGGGTAATTTCGCCAAAGTCAAGTTTGCCCGAAACTCGGAGACCAATGAGAATGTGGCTATCAAAATTCTTGACAAAGAAAAAGTTCTCAAGCACAAAATGATTGGTCAGTCAAGCAAAGGAAGGTTGAAAGAAGATGAAGCCCGGAAATACTTTCAACAGCTTATTTGTGCTGTGGATTATTGTCACAGTAGAGGTGTTTTCCATAGAGACCTAAAGCCTGAGAATTTGTTGCTGGATGCTAGCGGAGTGCTAAAAGTATCAGATTTTGGATTGAGTGCTCTGCCTCAACAAGTTCGAGGAGATGGGCTGCTTCACACAACATGCGGTACGCCAAATTATGTTGCCCCAGAGGTGATCCACAACAAAGGTTATGATGGTGGCAAGGCAGATCTTTGGTCATGTGGTgttattctttttgttttaatgGCTGGTTTTTTGCCTTTTGAGGAAAGCAACCTTGTGACTTTATATAAAAAGataTCCAAAGCTGACTTCACGTGTCCTCCATGGTTCTCTTCAAGTGCAAAGAAACTAATCATGAGAATTCTTGATCCCAATCCTGCTACACGGATTACAATAGCTGAAGTCATTGAGAATGAATGGTTCAAGAAAGGATATGTGCCTCCTAGATTTGAGCAGCCCAATATTAGTCTTGATGATGTAGATGCTATATTTGGTGAAGCAATGGATTCTCAAAATCTTGTTGTAGAGAGGAGGGAGGAGGTGCCTGCAGCCCCTATAACTATGAATGCATTTGAACTTATCTCTACATCTCAAGGCCTCAACCTTAGTAGTCTTTTCGAGAAGCAAATGGGTCTGGTTAAAAGGCAAACACGATTCACATCCAAATGTTCAGCAAACGAGATAATTTCAAGAATTGAGCAAGCTTCAATGCCTCTGGGTTTTGAGGTCAAGAAGAACAACTATAAGATCTTTGAGGTGGCCCCTTCACTTTACATGGTTGAGCTTCGCAAAGCTGGAGGAGATACTTTGGAATTTCACaagTTCTACAAGAGCCTATCTACTGGACTGAAAGATATTGTCTGGAAAGCGGAACCTATTGATGAAGAGACGGATGGTGCTAGTGCATCCACCTAG 1161 0.4264 MASRPGRTRVGKYELGRTLGEGNFAKVKFARNSETNENVAIKILDKEKVLKHKMIGQSSKGRLKEDEARKYFQQLICAVDYCHSRGVFHRDLKPENLLLDASGVLKVSDFGLSALPQQVRGDGLLHTTCGTPNYVAPEVIHNKGYDGGKADLWSCGVILFVLMAGFLPFEESNLVTLYKKISKADFTCPPWFSSSAKKLIMRILDPNPATRITIAEVIENEWFKKGYVPPRFEQPNISLDDVDAIFGEAMDSQNLVVERREEVPAAPITMNAFELISTSQGLNLSSLFEKQMGLVKRQTRFTSKCSANEIISRIEQASMPLGFEVKKNNYKIFEVAPSLYMVELRKAGGDTLEFHKFYKSLSTGLKDIVWKAEPIDEETDGASAST 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0023 386 Gene3D Kinase associated domain 1, KA1 265 371 - -
Sto13g0023 386 CDD CIPK_C 271 367 - -
Sto13g0023 386 SMART serkin_6 13 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g0023 386 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 60 373 - -
Sto13g0023 386 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 7 60 - -
Sto13g0023 386 ProSiteProfiles NAF domain profile. 265 289 IPR018451 GO:0007165
Sto13g0023 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 87 99 IPR008271 GO:0004672|GO:0006468
Sto13g0023 386 Pfam Protein kinase domain 59 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g0023 386 PANTHER - 7 60 - -
Sto13g0023 386 PANTHER - 60 373 - -
Sto13g0023 386 Pfam NAF domain 268 327 IPR004041 GO:0007165
Sto13g0023 386 ProSiteProfiles Protein kinase domain profile. 1 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g0023 386 Gene3D Transferase(Phosphotransferase) domain 1 54 228 - -
Sto13g0023 386 SUPERFAMILY Protein kinase-like (PK-like) 10 241 IPR011009 -
Sto13g0023 386 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Sto13g0023 386 Gene3D Phosphorylase Kinase; domain 1 11 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0023 Sto-Chr13 161451 167559 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0023 58 385 CBL-interacting serine-threonine protein kinases AT1G30270 76.353 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sto13g0023 Pkinase 8.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0023 - - gmx:100788746 627.091