Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0014 ATGTGGTGTTTAATACAGCCTAAGCAAATCCATGAGATCAAGGATTTTCTTCTCACTGCCCGAAGGAAAGATGCAAGGTCAGTGAAAATCAAGAGGAGCAGAGATGTTGTTAAGTTCAAGGTTCGTTGCTCTAAGTATCTTTACACACTCTGTGTGTTTGACCCAGAGAAGGCTGATAAGTTGAAGCAATCACTTCCTCCAGGTTTGAGTGTTCAGGACCTGTAA 225 0.4222 MWCLIQPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSLPPGLSVQDL 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0014 74 Pfam Ribosomal L38e protein family 7 73 IPR002675 GO:0003735|GO:0005840|GO:0006412
Sto13g0014 74 PANTHER 60S RIBOSOMAL PROTEIN L38 7 74 IPR002675 GO:0003735|GO:0005840|GO:0006412
Sto13g0014 74 Gene3D - 6 74 IPR038464 -
Sto13g0014 74 PANTHER 60S RIBOSOMAL PROTEIN L38 7 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0014 Sto-Chr13 123947 124789 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g0014 7 74 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 94.118 1.24e-42 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0014 K02923 - gmx:100805669 138.658