Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g2707 ATGTCCCCGATTGGTTGCTATGGCAATGTTGGGAAACGAGTGGAGAAGGCCGAAAAGGAGGCCATGGAATTCGAAGAAGTGGGTTTCATCTTCTCAAAGTTTGATTTACAGAGATCGGCAACCCAACCAAAATTGAAATCAGAGAGCGAATCCCAAATTTGGACAGTAATCAAATTCCTCCAATTTGATATTATGGATGGCTTTGACTTgaaaaccaaaccaaccgatgAAGCATTAAGCCTCCTCCACACTCACCACATCTCCGAACCTAGCCTCAACACTCTCCTCACATTTAAACACGGAGATTTCGCTCCCTGCCTCACCAGAATCATGCAGATAGGGTTCTACGAGTCATGCGCTTATGTCGTTCTATTGTTGAAGTCCGTCCTTGGAGCGGCCGATTCTACAGTTTTATCAAATCTCCAAACAGAAATATTAGTTGAAGTGGTTCAAATCCTGAAGGATAGGATCTCACCATAA 480 0.4188 MSPIGCYGNVGKRVEKAEKEAMEFEEVGFIFSKFDLQRSATQPKLKSESESQIWTVIKFLQFDIMDGFDLKTKPTDEALSLLHTHHISEPSLNTLLTFKHGDFAPCLTRIMQIGFYESCAYVVLLLKSVLGAADSTVLSNLQTEILVEVVQILKDRISP 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g2707 159 PANTHER WDSAM1 PROTEIN 70 158 IPR045185 GO:0061630
Sto12g2707 159 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PUB23 70 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g2707 Sto-Chr12 25888146 25894256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g2707 75 158 U-box Gene Family AT2G35930 48.235 3.94e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g2707 - - gmx:100811969 103.605