Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g2211 TTGGATGAGCATTTGCAAGAAGAAAAAACTGCAGATTCTCATCATGAAGTGGTGAGGAGTGAAGAGGATTTCTTGAAATTCGGCATTCTAAACAGACGTCTGAACTTGGACATTCCTGGTCTTGAAGTGGATGCAAGCATTGAAGGTGAATTCAACTACGTAAGAGATGTGTTAGAGCTATCTGGGTTCATGGGCCATGATTCACCTGCCATGTGGTATTCCAATGACCAGCCAGTTGATCCCATAGTGTACGAAGAGCTAGAGGGATGCTTGCTCTTCGATCCAGAATGTTCTGATAATGTCAACCAAGAAAACGATAATTGCAACCATCTGCTTTTGTTTGATCTGGTCAATGAGGTATTGGTGGAGATTTTTGGGAGATCATATAGTTACTACCCGAAACCCTTGTCTTCTCTTTCCCATGTTCATCCACTACCAGTAGGGGACCATGTTCTTAGACAAGTGTGGACACTCATTAGTTGGTATCTGAGCTCAAATAATGCCGAGTTGTTTTACCCTTCCTTGGATTACTATGTGAGTCGAGACCTAGCAAGAAGTGATGGATGGATGAATCTACAATTTGATTCTGAATGCGTGGGGCTTGAGTTAGATGATTTGATTTTTGATGATCTCTTGGAAGAGATCATTTGCAGTTGA 657 0.4186 LDEHLQEEKTADSHHEVVRSEEDFLKFGILNRRLNLDIPGLEVDASIEGEFNYVRDVLELSGFMGHDSPAMWYSNDQPVDPIVYEELEGCLLFDPECSDNVNQENDNCNHLLLFDLVNEVLVEIFGRSYSYYPKPLSSLSHVHPLPVGDHVLRQVWTLISWYLSSNNAELFYPSLDYYVSRDLARSDGWMNLQFDSECVGLELDDLIFDDLLEEIICS 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g2211 218 Pfam Domain of unknown function (DUF4378) 50 214 IPR025486 -
Sto12g2211 218 PANTHER TRM32-LIKE PROTEIN (DUF3741) 5 218 - -
Sto12g2211 218 PANTHER PROTEIN TRM32 5 218 IPR044257 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g2211 Sto-Chr12 18432734 18433390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g2211 36 208 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 56.044 1.54e-60 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g2211 - - gmx:100807303 273.863