Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto12g2180 | ATGATACCACATAAGACAAAGCGTGGGGCAGCTGCTCTTGATCGATTGAAGGTCTTTGAGGGCATACCCCCTCCATATGACAAAATGAAGAGGATGGTTGTCCCTAATGCCCTGAAGGTTTTGAGGCTTCAGAAGGGACACAAGTACTGCTTGGTTGGTAGATTGTCATCTGAAGTGGGATGGAACTATTATGATACCATCAAGGaattggaaaagaagagaaaggaaagggCACAATTGGCCtatgagaagaagaagcaggTGACCAAATTAAGGTTGAAGGCTGAGAAGATTGCTGAGGAGAAGCTTGGTTCCCAACTGGAGATTCTTGCTCCGGTTAAGTACTGA | 348 | 0.3994 | MIPHKTKRGAAALDRLKVFEGIPPPYDKMKRMVVPNALKVLRLQKGHKYCLVGRLSSEVGWNYYDTIKELEKKRKERAQLAYEKKKQVTKLRLKAEKIAEEKLGSQLEILAPVKY | 115 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto12g2180 | 115 | Gene3D | - | 65 | 115 | - | - | |
| Sto12g2180 | 115 | PANTHER | RIBOSOMAL PROTEIN L13 | 1 | 115 | IPR005822 | GO:0003735|GO:0005840|GO:0006412 | |
| Sto12g2180 | 115 | Gene3D | Ribosomal protein L13 | 1 | 63 | IPR036899 | GO:0003735|GO:0005840|GO:0006412 | |
| Sto12g2180 | 115 | PANTHER | 60S RIBOSOMAL PROTEIN L13A-1-RELATED | 1 | 115 | - | - | |
| Sto12g2180 | 115 | SUPERFAMILY | Ribosomal protein L13 | 1 | 63 | IPR036899 | GO:0003735|GO:0005840|GO:0006412 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto12g2180 | Sto-Chr12 | 18081529 | 18082341 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sto12g2180 | 1 | 115 | Cytoplasmic Ribosomal Protein Gene Family | AT4G13170 | 83.478 | 2.34e-69 | 205 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto12g2180 | K02872 | - | oeu:111374406 | 207.608 |