Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g2091 TTGCTGAGAAATCGTCTAGGTGAAaggtttaattttaaaacttcaGTACGCCGCAGAACATACACAGGAGCGCAGTACCAAGCAATTACATATACAGAGGCTCAACATTCACTTCGTCCTGGCAATGAGGAGGACATATTTGATGTACTAATACATATTGGCAGCCACTTGGGGAAGAGAAATGCTATGGAAGACCATCGTATTTTTGAACATAAGCAAATTCAGGGACATAAATTCtcttttatttcaatatttgaTGGTCAAATGGATCACGATGTACCTCGTCACTTGCTATCTAATTTGTATGAAGCTATCGCAAAAGAGCCTGACTTCTGGACGACAAAAACTAAAGAAGTTGTCAGTAGAGCATATCGTATAACTGATTCGACCATTCTAGAGAAAGCAGTTGAATTAGAGAAAAGAGGTTCAACTGCTCTTACGGCGATATTGATTGACAGTCGCAAGCTGGTAATAGCCAATTTTGAGAATTCAAGGGCTGTCATATGCAAGAATGGTGTGGCTAAACAACTATTAGTGGATCACGAGCCAACCATAGAAAATGAGGATATTGAAAACAGAAGTGATTTTGTGTCAAATCTATATGCTCATATGGTATCAGAACAGAATTATAAAGTTCGAATTGCCGATGGTTCTTTGGGTGATGTAACTGGGATTGGAGAAGTCTCTTTGTCTGACTCTATCACTCTTAAGTCCGTATTGTTTGTTCCTAAGCTGAAATGCAATTTGTTATCAGTTGCCAAATTGACTCATGATTCTAATTGTAAAGCTGAGTTTTCAAATTCTTCATGTTCCTTTCAGGATGTGGATTCGGGGAAGATAATTGGCAATGCTAGGGTTTGTAATGATCTTTATCGGTTTGAAATGAACAAGGAGATTGCACCAAACAAAGAATCATTTACTGCAGGAATGATAGGAGACTCTTTGAAAGAAGATAGGGGCCAAGAAGTAGTAGATGAGACAAGAGCTGAGATTGAAGACCCTATGCATTGTCAAGATACTCCCTCAGATCCTCATTCTCATGAAAAAGGTACCACTGCTCCTAATATTGCCATCTCTGATGCATGTCCTGATGAGATCTTATCCCCTCCTATTGCAAAACGAAAGGGTGTAAGAACGTGTACCTTGCATCCTATCTCACAATTTGTTTCCTATGAGAAGCTTTCTccaaaatttcaagcatttGTTTCTAATCTTGACAAAGAGgattGTTCTTTGATCTTATTGAAGTTTTTCACTGGGTTATCCAGTTTTGGTACTTGTAACAGGGATGTTCCATTTGTGACAGAGGAGATCATAAAGCATGACTCGGGGGAGTATCTTATATTAACTGGGGATGGATTATGGGAGGTAATGACAAATCAAGAAGCAGTTGATTGTATCAAGGATATGGGTGCTAACTCAAGTGCTACTTCAGCAGCAAAGCATCTTGCTGAAGAGGCACTCAAAAGGAGGAGGAGCTCGGATGATACCTCCTGTATTGATATGAAATTTCATTCATATCCCACCTTATGTCGCATACGCTAA 1545 0.3825 LLRNRLGERFNFKTSVRRRTYTGAQYQAITYTEAQHSLRPGNEEDIFDVLIHIGSHLGKRNAMEDHRIFEHKQIQGHKFSFISIFDGQMDHDVPRHLLSNLYEAIAKEPDFWTTKTKEVVSRAYRITDSTILEKAVELEKRGSTALTAILIDSRKLVIANFENSRAVICKNGVAKQLLVDHEPTIENEDIENRSDFVSNLYAHMVSEQNYKVRIADGSLGDVTGIGEVSLSDSITLKSVLFVPKLKCNLLSVAKLTHDSNCKAEFSNSSCSFQDVDSGKIIGNARVCNDLYRFEMNKEIAPNKESFTAGMIGDSLKEDRGQEVVDETRAEIEDPMHCQDTPSDPHSHEKGTTAPNIAISDACPDEILSPPIAKRKGVRTCTLHPISQFVSYEKLSPKFQAFVSNLDKEDCSLILLKFFTGLSSFGTCNRDVPFVTEEIIKHDSGEYLILTGDGLWEVMTNQEAVDCIKDMGANSSATSAAKHLAEEALKRRRSSDDTSCIDMKFHSYPTLCRIR 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g2091 514 Pfam Protein phosphatase 2C 431 493 IPR001932 -
Sto12g2091 514 Pfam Protein phosphatase 2C 59 188 IPR001932 -
Sto12g2091 514 PANTHER PROTEIN PHOSPHATASE 2C 58-RELATED 432 503 - -
Sto12g2091 514 PANTHER PROTEIN PHOSPHATASE 2C 58-RELATED 51 203 - -
Sto12g2091 514 SMART PP2C_4 36 502 IPR001932 -
Sto12g2091 514 Gene3D - 427 507 IPR036457 -
Sto12g2091 514 SUPERFAMILY PP2C-like 426 505 IPR036457 -
Sto12g2091 514 PANTHER ALPHABET, ISOFORM E-RELATED 51 203 - -
Sto12g2091 514 SUPERFAMILY PP2C-like 49 191 IPR036457 -
Sto12g2091 514 Gene3D - 48 242 IPR036457 -
Sto12g2091 514 MobiDBLite consensus disorder prediction 333 355 - -
Sto12g2091 514 ProSiteProfiles PPM-type phosphatase domain profile. 50 504 IPR001932 -
Sto12g2091 514 PANTHER ALPHABET, ISOFORM E-RELATED 432 503 - -
Sto12g2091 514 CDD PP2Cc 55 193 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g2091 Sto-Chr12 17028405 17035483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g2091 432 505 PP2C-type Phosphatase Gene Family AT3G15260 58.108 1.95e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g2091 K17506 - fve:101303669 176.407