Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g2050 ATGGCAAATTTAACCAGAGTTGCGGGCACAACTAACCCGAATGTATGCCAGACAAGGAACCCAAGAAATCGCTCAACCCAAATACCTGCTGCCGCTACCAAAGCCACTGGCAACACTGAAGTCATTAGTGTGACAATTGAAAAGGCGGGTACCTCAAACGTGATCCAAAACCCTAGGGGCACTGGCAAACGGGGGCCACGGCCCCCTAAGATGCTGCGAGCATGGCTCTTGCTAGGGTTCGGAGGTGGGTTGCCATGGGGCCAGCACAATCAGTCCCTCATCAGTGAGAACGACCAATTGCGCGAGGAGATGACTAGGCTCAAGCTGGATCTGGCTTGGTTTTACCAACACCTGGCATACCAATACTATCAGCCGACCGCCCAAGCTCTGGCGAGTCAGCCCTCAAGGGAGATCCTTTACTCTGCACAAGGCCAAACAAACCCCGTGCAAAGATCAGAACTAGGAAATGGTCAGTTTTATCGAAGAGTCGGAGACCGGTTAGTCTCTTATCGGAAAATCACCGTCGATCGTGCCGGGAACGGTAACTTCTCCGCCATACAAGCCGCCATAAATTCAGTTCCTTCTGGCAACAAGTTCTGGGTTTCCATCAATGTAAAGGCAGGCACCTAtagGGAAAAGCTGAAGATTCCTTATGACAAGCCTTACATCATACTGAAAGGAGAGGGAAAGAGGAAAACTATAGTTGTTTGGGATGACCATGATACAGTCGCACAGAGTCCTACATTCACATCCATGGCTGATAATGTTGTCGTCAAATGCATGAGCTTTAGGAATTCATATAATAATCCAATTAACAGTAACCCCCGGCAACCTGCCGTGGCGGCGATGGTAGCCGGCGACAAGACTCGCTTCTTTCGAGTCGGCTTCTTCGGTTTACAAGATACTTTGTGGGATGATCAAGGAAGACATTACTACAAGCTTTGCACCATACAAGGTGCtgtagattttatttttggtgcagGCCAATCTCTATTTGAGAGATGTTCTATATCAGTAATTGGTGGAGCTCTAGAGGCAGGCCTTCCTGGGTTTATCACAGCACAAGGGAGAACAAATCCAAATGATGCAAATGGGTTTGTGTTCAAAGAATGCAATGTGTTTGGAAATGGTTCAACATATTTGGGAAGGCCTTGGAGAGCTTACTCTAGAGTTCTCTTCTACAGAACTAATATGTCAAACATTGTACAACCCAAAGGTTGGGAGCCATGGAATTTCGTTGGCCAAGAGAATCAAATTACATTTGCAGAGTATGGGTGTTATGGAGATGGATCTGACACTTCTGAGAGAGTGAAATGGACAAAAAAGCTGGACGTGGCAACGGTTGAGCAGATGACAAGCATGAGCTTCATCGACTCTGAAGGATGGCTTCAGACTCAAATATTTTGA 1407 0.4634 MANLTRVAGTTNPNVCQTRNPRNRSTQIPAAATKATGNTEVISVTIEKAGTSNVIQNPRGTGKRGPRPPKMLRAWLLLGFGGGLPWGQHNQSLISENDQLREEMTRLKLDLAWFYQHLAYQYYQPTAQALASQPSREILYSAQGQTNPVQRSELGNGQFYRRVGDRLVSYRKITVDRAGNGNFSAIQAAINSVPSGNKFWVSINVKAGTYREKLKIPYDKPYIILKGEGKRKTIVVWDDHDTVAQSPTFTSMADNVVVKCMSFRNSYNNPINSNPRQPAVAAMVAGDKTRFFRVGFFGLQDTLWDDQGRHYYKLCTIQGAVDFIFGAGQSLFERCSISVIGGALEAGLPGFITAQGRTNPNDANGFVFKECNVFGNGSTYLGRPWRAYSRVLFYRTNMSNIVQPKGWEPWNFVGQENQITFAEYGCYGDGSDTSERVKWTKKLDVATVEQMTSMSFIDSEGWLQTQIF 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g2050 468 MobiDBLite consensus disorder prediction 1 25 - -
Sto12g2050 468 Pfam Pectinesterase 173 459 IPR000070 GO:0030599|GO:0042545
Sto12g2050 468 ProSitePatterns Pectinesterase signature 2. 317 326 IPR033131 -
Sto12g2050 468 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 169 466 - -
Sto12g2050 468 PANTHER PECTINESTERASE 10-RELATED 169 466 - -
Sto12g2050 468 SUPERFAMILY Pectin lyase-like 169 465 IPR011050 -
Sto12g2050 468 Coils Coil 90 110 - -
Sto12g2050 468 Gene3D - 169 468 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g2050 Sto-Chr12 16313732 16335327 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g2050 183 416 Carbohydrate Esterase AT2G19150 47.234 8.59e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g2050 - - mnt:21404445 507.679