Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g2022 ATGCGTAGGTGGTTTTGTTGCACTCGTCATGTGGAAGAGTCTTACCCATCAAATGAAAATGAGCATCTGAAAAGTCCAAGGAATTATGGAGATGATGACCGGAAAGGCTCAAAGATGTCAGCTCCTGTCAAACATGAAACACAAAAGGCTGCACCACTACCTATTGAAGTGCCAGCATTATCTTTAGAGGAGCTAAAGGAAAAGACAGACAACTTTGGATCAAAAGCATTAATTGGTGAAGGATCATACGGAAGAGTGTATTATGCGACCTTGAATAATGGAAAAGATGTTGCTGTGAAAAAGCTCGATGTTTCATCTGAAGAGGAATCAAATGTTGAGTTTTTGGCTCAGGTTTCCATGGTCTCAAGATTGAAACACGAGAATTTTGTTGAGTTGCATGGTTACTGTGTTGAGGGAAATCTGCGTGTACTGGCATATGAATTTGCAACTATGGGCTCACTTCATGACATATTGCATGGTAGAAAGGGAGTTCAAGGGGCTCAACCAGGGCCAACACTTGACTGGATGCAGCGAGTTAGAATCGCAGTTGATGCAGCAAGGGGACTGGAATATTTGCATGAGAAAGTTCAACCTTCTATTATACATAGAGATGTTAGATCAAGCAATGTGCTTATCTTTGAAGATTACAAAGCAAAGATAGCTGATTTTAATCTTTCCAATCAGTCTCCTGACATGGCTGCACGCCTTCATTCCACTCGAGTCTTGGGAACATTTGGTTATCATGCTCCCGAGTATGCAATGACTGGTCAGTTGACTCAAAAGAGTGATGTCTATAGTTTCGGTGTTGTTCTTCTTGAGCTTCTTACAGGGAGAAAACCTGTTGATCATACCATGCCTCGTGGACAGCAAAGCCTTGTTACATGGGCTACTCCAAGATTGAGTGAAGATAAAGTTAAACAATGTGTGGATCCAAAATTGAAGGGAGAATATCCTCCAAAAGGAGTTGCTAAGCTGGCAGCTGTTGCAGCACTGTGTGTGCAGTATGAAGCTGAGTTTAGGCCAAACATGAGCATCGTTGTTAAAGCACTTCAACCACTTCTGAAGCCTCCTGCACCTGTTCCTGCACCTGTTCCTGCACCAGAAACTTGA 1110 0.4261 MRRWFCCTRHVEESYPSNENEHLKSPRNYGDDDRKGSKMSAPVKHETQKAAPLPIEVPALSLEELKEKTDNFGSKALIGEGSYGRVYYATLNNGKDVAVKKLDVSSEEESNVEFLAQVSMVSRLKHENFVELHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWMQRVRIAVDAARGLEYLHEKVQPSIIHRDVRSSNVLIFEDYKAKIADFNLSNQSPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKPPAPVPAPVPAPET 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g2022 369 MobiDBLite consensus disorder prediction 15 50 - -
Sto12g2022 369 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 3 1 363 - -
Sto12g2022 369 Gene3D Transferase(Phosphotransferase) domain 1 150 357 - -
Sto12g2022 369 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 363 - -
Sto12g2022 369 Pfam Protein tyrosine and serine/threonine kinase 77 350 IPR001245 GO:0004672|GO:0006468
Sto12g2022 369 SMART tyrkin_6 72 350 IPR020635 GO:0004713|GO:0006468
Sto12g2022 369 Gene3D Phosphorylase Kinase; domain 1 34 148 - -
Sto12g2022 369 ProSiteProfiles Protein kinase domain profile. 72 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g2022 369 PIRSF ILK 27 356 - -
Sto12g2022 369 SUPERFAMILY Protein kinase-like (PK-like) 56 365 IPR011009 -
Sto12g2022 369 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Sto12g2022 369 MobiDBLite consensus disorder prediction 15 42 - -
Sto12g2022 369 ProSitePatterns Tyrosine protein kinases specific active-site signature. 200 212 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g2022 Sto-Chr12 16066097 16069348 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g2022 7 351 Receptor kinase-like Gene Family AT4G02010 46.418 3.86e-92 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Sto12g2022 PK_Tyr_Ser-Thr 4.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g2022 K13436 - gmx:100790016 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g2022 12 16066097 16069348 Sto12g2022 12 16066097 16069348 ECH