Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g2011 ATGGAGAATGATTTGAAGCCTAGAGAGGGGATGGAATTTGACACCACTGAGGATGCTTGCAATTTTTGGACTGATTATGGTAGAAGAATTGGTTTTGGAGTGAGGAGGTCATTTACAAATAAGAGTAAGAAACATGGTTCAATAACTTCTTGTAGATTCGTGTGTTGCATAGAAGGAGTGAGAGCAAAAGATAAGAGGGATTATCTAACGATTAATCCTCGACCTGAGACTAGAACAGATTGTAAAGCTAGAATGGCGATTTCATATACTAATGGAAAGTTCAAGGTGTATGAGTTTGTTGAGGAACACAACCACGATCTACATCTCCCACAAACAAGTCACATGTTAGCATGCCACCAAAAGTTAACCAAAGTTCAAGCACAAGAAATTGAATTGGCAGATGATTTAGGGCTTCAACAAAGAGCTACATTCAATCTTATGAGCACTTATGCAGGGGGAAGGGATAATCTTGGATATACTATAGTTCCTTTCTCATTCCTTTTCCTCTTATTTGAGGCTTTAACACCAGAGGATGACGCTAGGAAACCTTGGATTGATCAAATTGTGCAGGAATCAGAGATTTGCTTCAGGAAACCCTTAGCATCAGAATCCTCTGAAATGCCTCCCCTCAAGGATTCCGGAATAGAATGTTGCATGATCATGACACACATGCGGTGCATGGTGAAAAAAAAGCCTCATACAATATTCACCGATCAAGATCAAGCGATGGCTAAAGCAACACTTGAGGTAATGCTTAAAACTAAGCATGGGTTGTGCACATGGTATTTGAGGCAAAATGGTATCAAACACTTGGGCAACTTAATGAAGGGTGGATCTTGCTTCTTGCGGGACTTTTCATCTTGTATGTATGACTATGAAGATGAGGCAGAGTTTGAGAGGTCAACAAAAGAGGCTAGAAGTGGTGTTATTTTTTATGCTGAAGGAAAGGAAATTGTTGAAGATTCGAGATTAGCTTACACGCAACGAAATCGAAAACTTTACCCTAAGGTTGTTAGGATAGCATCTGAAGTGTCTGCTTGTGAAAAGGAACATAACTTTATAAACAAAAGTTTGGATTACTTGATGAAGCAAGTGATGAAGTATCGTACAAGAACAAAGCATGCAAGTAATGACACAAATCATGAGATAACACCTAATAGTCAAAGCATGTCACAACCAAAAGGGATCAAGAAAAGACACGGACGTAAGACGACACGTCGTTTGAATAGTTGGCATGAACGTCAACATAATGGGATAAAGAGTTCTGATGTCAATGTTTCACAAAGCCAATAA 1293 0.3913 MENDLKPREGMEFDTTEDACNFWTDYGRRIGFGVRRSFTNKSKKHGSITSCRFVCCIEGVRAKDKRDYLTINPRPETRTDCKARMAISYTNGKFKVYEFVEEHNHDLHLPQTSHMLACHQKLTKVQAQEIELADDLGLQQRATFNLMSTYAGGRDNLGYTIVPFSFLFLLFEALTPEDDARKPWIDQIVQESEICFRKPLASESSEMPPLKDSGIECCMIMTHMRCMVKKKPHTIFTDQDQAMAKATLEVMLKTKHGLCTWYLRQNGIKHLGNLMKGGSCFLRDFSSCMYDYEDEAEFERSTKEARSGVIFYAEGKEIVEDSRLAYTQRNRKLYPKVVRIASEVSACEKEHNFINKSLDYLMKQVMKYRTRTKHASNDTNHEITPNSQSMSQPKGIKKRHGRKTTRRLNSWHERQHNGIKSSDVNVSQSQ 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g2011 430 MobiDBLite consensus disorder prediction 379 394 - -
Sto12g2011 430 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 146 IPR031052 GO:0006355
Sto12g2011 430 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 222 300 IPR031052 GO:0006355
Sto12g2011 430 PANTHER OS03G0181600 PROTEIN 222 300 - -
Sto12g2011 430 PANTHER OS03G0181600 PROTEIN 4 146 - -
Sto12g2011 430 MobiDBLite consensus disorder prediction 371 430 - -
Sto12g2011 430 Pfam FAR1 DNA-binding domain 21 107 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g2011 Sto-Chr12 16014096 16023118 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto12g2011 FAR1 1.5e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g2011 - - aprc:113855580 244.202