Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g2002 CTGGACGACCTATCAGCTAGGACGAAGGTGGCGGAGGCGCTCACACGAATCGTCGGGGAGCGGCAGAGGGACACCGAAAAGAGATCGGCCATACTTGGAGCTCTCATGGTCTCCGGCGACCAAACAGATCGTGGATTTCATTCTCCTCTTCTCGTCGATGGTTGTGAGACCACTATCATGACTCTCGCCTTCAAGTTCCTAACTGAGAATCCTCTTGCCTTGGCTCAGCTTAAGGTGAAAAAGAAGCAATTCTTTCGGAACTTTATGGAAATAAATCTGTACGGTGTTGTTGGGAGTATGAtatcatttttcattatatCACTGGGTTCAATTCAGCTCTTAAAAAACTTGGACATCGGTTATCTGGAGTTGGGAGATTATTTTGGTAAATTTCTACCATATTGTAGTCCTCTGTTTCAGAAAAAAGCGTGCGACTGTATTTTTGTGTACCTTGTAGCACTTGGGGCAGTgtttttagctacggatttggtGTGCACGTTGCAGGTGCTTAATCAGGAAGAGACGCCTCTTCTCTACAATCTAGTTTTTGGTGAAGGTGTTGTTAATGATGCAACATCTGTGAACAAGtcttctaggttcttcctcaGGAAACCTTAG 618 0.4175 LDDLSARTKVAEALTRIVGERQRDTEKRSAILGALMVSGDQTDRGFHSPLLVDGCETTIMTLAFKFLTENPLALAQLKVKKKQFFRNFMEINLYGVVGSMISFFIISLGSIQLLKNLDIGYLELGDYFGKFLPYCSPLFQKKACDCIFVYLVALGAVFLATDLVCTLQVLNQEETPLLYNLVFGEGVVNDATSVNKSSRFFLRKP 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g2002 205 ProSiteProfiles cAMP/cGMP binding motif profile. 102 130 IPR000595 -
Sto12g2002 205 PANTHER SODIUM/HYDROGEN EXCHANGER 152 194 - -
Sto12g2002 205 PANTHER SODIUM/HYDROGEN EXCHANGER 152 194 IPR018422 GO:0006812|GO:0015299|GO:0016021
Sto12g2002 205 Gene3D - 151 196 - -
Sto12g2002 205 PANTHER SODIUM/HYDROGEN EXCHANGER 75 129 - -
Sto12g2002 205 Pfam Sodium/hydrogen exchanger family 77 194 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Sto12g2002 205 PANTHER SODIUM/HYDROGEN EXCHANGER 75 129 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g2002 Sto-Chr12 15898254 15899752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g2002 75 194 Antiporters AT5G27150 57.500 7.19e-35 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g2002 - K14724 egr:104456830 139.428