Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1954 CTGGTAgcttcattattattttcttgtcTTTTCCTGACTTGCTGGGGAGGAAACAACAATGGCAACAACATGGCTAATTTCCAATTGAATGATGATGTTCTTGGCTTGATTGTGTTCAAATCCGACCTCCAAGACCCTTCCTCACACCTGGCCTCGTGGAACGAGGACGACGTGAGCGCGTGCTCGTGGCGGTTCGTGCGCTGCGATCCGGCGACCGGGAGAGTCTCCGAGGTCACGCTGGACGGCCTCGGCCTGTCGGGGAAGATAGGAAGAGGTCTTGAGAAGTTGCAGCATCTCAAGGTACTGTCCCTCTCACATAACAACATAAGTGGGACTATCACTCCTTCACTTGCTCTTTCCAATACTCTTGAGAGCCTAAACCTTAGTCACAACACCCTCTCTGGTCCCATCCCTACTTCCCTTGTGAGCATCATGAGTTCAGTAAGGTTCCTTGATCTCTCACAGAATTCATTCTCAGGACAAGTCCCTCAGAATCTCTTCCAGAATTGCCCCTCCCTTCATTACCTTTCTCTATCTTGGAATATGCTTGAAGGCTCCATTCCTACCTCAATTTCCAGGTGCTCCTTGTTGAATACCCTTAATCTTTCAAACAATGATTTCTCTGGAAATGTGGACTTCTCTGCCATTTGGTCTTTAAAGAGACTTAGGACTTTGGATCTGTCAAACAATGCCTTCTCTGCAAATTTACCTTCTGGAATATCAGCAATACATAACTTGAAAGAGATGTTATTGCAAAACAATCACTTCTCAGGACCATTGCCTGATGATATTGGACTATGCCTTCACTTAAAAAGGTTGGATTTAAGTGATAATGTGTTCACTGGACCACTTCCAGCATCACTTGGGGGGCTATATTCTTTGACCTTTCTAAAGGCATCAAATAATTTGTTAACCAATGAACTTCCTCAATGGATTGGTAATATGTCAAGCTTGGAGTACCTTGATCTCTCGAACAATCAGTTCGCCGGAAGCGTCCCGGCTTCGGTTGGCAACCTGAGATCGCTGACGTATCTCGATCTTTCGGATAACAAGTTTGTGGGAGGAATTCCGCCATCATTGGCTTCCATTTCTAAGTTATCCTTCATTTATCTTAGAGGTAATGGTTTCAATGGTAGCATACCAGAGGGCTTGTTTGGCAGCCTAGGATTTTTGGAGGAAATAGACTTTTCTCATAACGAGCTGGCGGGTTCGATCCCTAAAGAGATAGGACTTCTTTCGAAACTAAAGTATTTGAATCTTTCTTGGAATGATCTTCACTCTGAAATGCCCCCAAAGTTGGGTCTCCTACAGAATCTTACAGTTTTAGATCTTCAGAGGAATTCTTTATATGGTTCTATTCCAGAGGATTTGTGTGATTCAGGCAATTTGGCCATTCTTCAACTGGATGGAAATTCATTGAATGGGGATATTCCAGATGAGATTGGGAATTGTACATCTCTTTACTTGCTGAGTTTGTGTCACAACAATTTGAGTGGTTCAATTCCCAAGTCCATGTCAAAGCTGAACAAACTCAAAGTCCTCAAATTGGAGTTCAATGAACTAAGTGGAGAGATACCCCAAGAACTTGGGATGCTCCAAAACCTTCTTGCAGTGAATATATCATACAATAGGCTCACAGGAAGGCTTCCCACTGGAAGTATATTTCAAAACTTGGACAAAAGTTCCTTGGAAGGGAACTTAGGTCTTTGCTCACCATTGCTGAAAGGTCCATGCAAGATGAATGTGCCAAAGCCACTAGTTCTTGACCCAAATGCATATAACAATCAAATgcAAAGAAATgatgcatcatcatcatctattcCAAGCAGAATACATCACCACAAGTTCTTGAGTGTTTCTGCCATTGTAGCAATTTCAGCTGCTTTTGTGATCATACTAGGAGTGATTGCTATTAGCCTTTTGAATGTTTCTGTGAGGAGAAGGCTAGCTTTTGTGGATAATGCTTTGGAAAGCATGTGCTCAAGCTCTTCAAGATCAGGAAGTCCACCCACCGGAAAGCTGATCCTATTCGATTCGcgatcgtcgtcgtcgtcgtcgtctctCAGTTCGATCAGCAACCCGGAATCCTTGCTCAGCAAGGCATCTGAGATAGGAGAAGGAGTGTTTGGAACAGTTCACAAGGTTGCTTTGGGATCATCCCAAGGTGGATTAATGGTAGCAATTAAGAGACTTGTGACTTCAAACATAATTCAATACCCTGAAGACTTTGATAGAGAAGTTAGAATCCTTGGAAAGGCAAGGCACCCAAATCTAATAGCATTGAAAGGATACTATTGGACTCCCCAAATGCAGCTTTTGGTCACAGAGTATGCACCAAATGGTAGCTTGCAAGCCAAGCTACATGAAAGGCTTCCTTCAACCCCACCTCTTTCATGGCCTAATAGGTTCAAAATCTTGCTTGGAATAGCAAAAGGGCTTGCTCATTTGCACCACTCATTCCGCCCGCCGATCATACACTACAACATTAAGCCGAGCAACATCCTCCTCGACGAGAACTGCAACGCGAAGATCTCGGATTTCGGGTTGGCCCGGCTCCTGATAAAGCTAGACAGGCATGTGATGAGCAATAGGTTCCAGAGCGCATTAGGGTACGTAGCACCGGAATTGGCATGCCAGAGCTTGAGGGTGAATGAGAAATGTGACATCTATGGTTTTGGTGTGATGATACTTGAGCTAGTGACTGGAAGAAGGCCAGTGGAATATGGAGAGGACAATGTCCTAATACTTAAGGACCATGTGAGGGTCTTGCTTGAGCAAGGGAATGTGTTGGAATGTGTGGATCCAAGCATGAGTGATTACCCTGAGGATGAGGTTTTGCCAGTTCTGAAGCTTGCTTTGGTGTGTACTTCTCAGATACCTTCAAGCAGACCATCAATGGCTGAAGTGGTGCAAATATTGCAGGTCATTAAAACTCCTATTCCCCAAAGGATGGAAATGTTTTGA 2964 0.4295 LVASLLFSCLFLTCWGGNNNGNNMANFQLNDDVLGLIVFKSDLQDPSSHLASWNEDDVSACSWRFVRCDPATGRVSEVTLDGLGLSGKIGRGLEKLQHLKVLSLSHNNISGTITPSLALSNTLESLNLSHNTLSGPIPTSLVSIMSSVRFLDLSQNSFSGQVPQNLFQNCPSLHYLSLSWNMLEGSIPTSISRCSLLNTLNLSNNDFSGNVDFSAIWSLKRLRTLDLSNNAFSANLPSGISAIHNLKEMLLQNNHFSGPLPDDIGLCLHLKRLDLSDNVFTGPLPASLGGLYSLTFLKASNNLLTNELPQWIGNMSSLEYLDLSNNQFAGSVPASVGNLRSLTYLDLSDNKFVGGIPPSLASISKLSFIYLRGNGFNGSIPEGLFGSLGFLEEIDFSHNELAGSIPKEIGLLSKLKYLNLSWNDLHSEMPPKLGLLQNLTVLDLQRNSLYGSIPEDLCDSGNLAILQLDGNSLNGDIPDEIGNCTSLYLLSLCHNNLSGSIPKSMSKLNKLKVLKLEFNELSGEIPQELGMLQNLLAVNISYNRLTGRLPTGSIFQNLDKSSLEGNLGLCSPLLKGPCKMNVPKPLVLDPNAYNNQMQRNDASSSSIPSRIHHHKFLSVSAIVAISAAFVIILGVIAISLLNVSVRRRLAFVDNALESMCSSSSRSGSPPTGKLILFDSRSSSSSSSLSSISNPESLLSKASEIGEGVFGTVHKVALGSSQGGLMVAIKRLVTSNIIQYPEDFDREVRILGKARHPNLIALKGYYWTPQMQLLVTEYAPNGSLQAKLHERLPSTPPLSWPNRFKILLGIAKGLAHLHHSFRPPIIHYNIKPSNILLDENCNAKISDFGLARLLIKLDRHVMSNRFQSALGYVAPELACQSLRVNEKCDIYGFGVMILELVTGRRPVEYGEDNVLILKDHVRVLLEQGNVLECVDPSMSDYPEDEVLPVLKLALVCTSQIPSSRPSMAEVVQILQVIKTPIPQRMEMF 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1954 987 Gene3D Ribonuclease Inhibitor 291 581 IPR032675 -
Sto12g1954 987 SUPERFAMILY RNI-like 214 550 - -
Sto12g1954 987 ProSiteProfiles Protein kinase domain profile. 698 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1954 987 SUPERFAMILY L domain-like 29 230 - -
Sto12g1954 987 Pfam Leucine Rich repeat 120 135 IPR001611 GO:0005515
Sto12g1954 987 Pfam Leucine Rich repeat 96 111 IPR001611 GO:0005515
Sto12g1954 987 Pfam Leucine Rich repeat 267 282 IPR001611 GO:0005515
Sto12g1954 987 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 14 979 - -
Sto12g1954 987 PANTHER RECEPTOR PROTEIN KINASE 14 979 - -
Sto12g1954 987 SUPERFAMILY Protein kinase-like (PK-like) 683 977 IPR011009 -
Sto12g1954 987 SMART LRR_typ_2 315 338 IPR003591 -
Sto12g1954 987 SMART LRR_typ_2 219 243 IPR003591 -
Sto12g1954 987 SMART LRR_typ_2 436 460 IPR003591 -
Sto12g1954 987 SMART LRR_typ_2 96 121 IPR003591 -
Sto12g1954 987 SMART LRR_typ_2 412 435 IPR003591 -
Sto12g1954 987 SMART LRR_typ_2 508 532 IPR003591 -
Sto12g1954 987 SMART LRR_typ_2 145 169 IPR003591 -
Sto12g1954 987 SMART LRR_typ_2 363 387 IPR003591 -
Sto12g1954 987 SMART LRR_typ_2 170 194 IPR003591 -
Sto12g1954 987 SMART LRR_typ_2 339 362 IPR003591 -
Sto12g1954 987 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Sto12g1954 987 ProSiteProfiles Leucine-rich repeat profile. 98 120 IPR001611 GO:0005515
Sto12g1954 987 Gene3D Ribonuclease Inhibitor 30 188 IPR032675 -
Sto12g1954 987 Gene3D Ribonuclease Inhibitor 189 287 IPR032675 -
Sto12g1954 987 Gene3D Transferase(Phosphotransferase) domain 1 782 984 - -
Sto12g1954 987 Pfam Leucine rich repeat 366 425 IPR001611 GO:0005515
Sto12g1954 987 Pfam Leucine rich repeat 148 207 IPR001611 GO:0005515
Sto12g1954 987 Pfam Leucine rich repeat 300 352 IPR001611 GO:0005515
Sto12g1954 987 ProSitePatterns Protein kinases ATP-binding region signature. 704 729 IPR017441 GO:0005524
Sto12g1954 987 CDD STKc_IRAK 704 974 - -
Sto12g1954 987 Gene3D Phosphorylase Kinase; domain 1 698 781 - -
Sto12g1954 987 Pfam Protein kinase domain 700 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1954 Sto-Chr12 15387368 15391538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1954 27 984 Receptor kinase-like Gene Family AT3G28040 62.323 0.0 1165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Sto12g1954 Pkinase 5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1954 - - gmx:100813764 1491.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1954 12 15387368 15391538 Sto12g1954 12 15387368 15391538 ECH