Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1936 ATGGAGCTTTTCAGTGGGAACCTTAGGACAATTATCAGCTTTGATTGCCAGACACTGAAGAAGGCAACCAAGAATTTTCATTCTGGTAATCTTCTCGGAAGTGGTGGATTTGGGCCGGTCTATCGGGGAAAGCTGGCAGATGGAAGGCTAATTGCTGTTAAGAAACTTTCTCTTAACAAATCCCAGCAAGGAGAAAAAGAATTTCTATCAGAGATGACAGAAGATCTTGTTAaatttttactgtttttcttaATCCCAAAACTGAACTCTTTCTTTGGATGCTCCAACATTGTAGGAAACAGTGATCAATTTCTGAATTGGAGCACTAGATTCCAAATTATTCTTGGAATAGCGCGGGGATTGCAATATTTACACGAGGATTCACACCTACGAATCGTTCACCGAGATATCAAAGCAAGCAACATTCTTCTCGACGAAAAGTTTCAGCCAAGGATTGGAGACTTTGGGCTAGCTAGATTCTTCCCTGAAGACCAAGATTACCTCAGCACTCAGTTTGCTGGAACATTCAAGTTATCTCATAGTTATAGTTGTTTACTTGGAGATTTAAAGAAGATATCAGCATGGAAACTTTATGAGAACTCAAGGTGGATGGAGTTTGTAGATCCGAAATTGCAGGAACATGGATTTGTAGAAAAGGCTGTTCTGCAAGCAATCCATGTGGCCTTCTTATGTCTTCAGACTCAAGCAAATTTAAGACCTCCCATGTCAGAGATAGTAGCATTGTTGACATTCAAAATTAACATGGTTGCAACACCAATGAGACCGGTCTTCCTTAATCGAAGGCGGCAAAAGGATGATGATTGCCACTCTTGGGAAGCCATATCTGACGCATTCCCTTCCCCGATGGCCAGTGATTCTGCATCCATTGCTAAACCTCCATACTAA 906 0.4073 MELFSGNLRTIISFDCQTLKKATKNFHSGNLLGSGGFGPVYRGKLADGRLIAVKKLSLNKSQQGEKEFLSEMTEDLVKFLLFFLIPKLNSFFGCSNIVGNSDQFLNWSTRFQIILGIARGLQYLHEDSHLRIVHRDIKASNILLDEKFQPRIGDFGLARFFPEDQDYLSTQFAGTFKLSHSYSCLLGDLKKISAWKLYENSRWMEFVDPKLQEHGFVEKAVLQAIHVAFLCLQTQANLRPPMSEIVALLTFKINMVATPMRPVFLNRRRQKDDDCHSWEAISDAFPSPMASDSASIAKPPY 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1936 301 Pfam Protein kinase domain 112 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1936 301 Gene3D Phosphorylase Kinase; domain 1 3 80 - -
Sto12g1936 301 PANTHER RECEPTOR-LIKE KINASE 12 177 - -
Sto12g1936 301 PANTHER RECEPTOR-LIKE KINASE 188 266 - -
Sto12g1936 301 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 12 177 - -
Sto12g1936 301 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 188 266 - -
Sto12g1936 301 Gene3D Transferase(Phosphotransferase) domain 1 183 263 - -
Sto12g1936 301 ProSiteProfiles Protein kinase domain profile. 26 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1936 301 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Sto12g1936 301 SMART serkin_6 26 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1936 301 SUPERFAMILY Protein kinase-like (PK-like) 14 271 IPR011009 -
Sto12g1936 301 Gene3D Transferase(Phosphotransferase) domain 1 95 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1936 Sto-Chr12 15197439 15200126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1936 13 294 Receptor kinase-like Gene Family AT1G56120 32.537 3.05e-50 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Sto12g1936 Pkinase 7.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1936 - - aprc:113874742 380.178