Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1887 ATGCCGGAGCCTCGTATAGGAGTGCGACGTGGTGGTGCTGCGCTGAACCGTAGCAGCCAAGAAGCCCCGGCGAGAAAATACGTCAAGACTAGGGCAGCAGTCGCCAGGGAAGCCGCAGCGGCGGCCGCGAAGGAAAGGCCAAGGACTAGATTGGCggtgaagaaattgaagcagaAGAAGCCGGTGATTGTGATATCGGAGTCCAGCAGTGGTATAAATCGCGTTAAAGAAAACAGGGCCAAGGAAGAAGTTGAAGGCATCATGGGTGACGGTAGTGGTGGGTTGAGCGCTAATAAGGGAGTTAAGCAAGATGATGGGAACGCTGCTCCTTTTCCTGAGAAGGTTCAAGTTGGAGGATCACCTATGTACAAGATAGATAGGAAACTGGGTAAAGGTGGGTTTGGTCAAGTTTTTGTTGGCCGTCGCATTACAGGTGGCAATGAGCGTTTGACAGGTGCCGGTGCAACGGAGGTGGCTCTAAAATTTGAACATAGAAACAGTAAAGGCTGTAACTACGGCCCTCCCTATGAGTGGCAAGTATACAACACCCTTGGTGGTAGTCATGGAATACCTAAAGTGCACTATAAAGGAAGACAAGGAGAATATTACATAATGGTCATGGACATGCTTGGTCCTAGCTTGTGGGATGTATGGAATTCCTCAAGCCAGTCGATGTCTGCTGAAATGGTTGCATGTATAGCAGTTGAGTCCTTATCGATCTTAGAGAAGATGCACTTGAGAGGTTATGTGCATGGCGATGTAAAACCAGAGAACTTTTTACTTGGTCAGCCAGCTACACCGCAAGAGAAGAAATTGTTTCTTGTTGACCTTGGATTAGCAACAAAGTGGAGAGACACCTCTAGTGGGCAGCATGTTGAGTATGATCAGCGCCCTGATATGTTCAGAGGGACTGTTCGATATGCTAGTGTTCATGCTCACTTGGGAAGAACTGCTAGTAGAAGGGATGATCTTGAGTCTCTTGCATATACACTCATTTTTCTTCATAAAGGTCGGTTACCATGGCAAGGTTATCAGGGTGATAACAAATCCTTCCTTGTTTGCAAAAAGAAGATGGGAACCTCTCCTGAGATGATGTGCTGCTTCTGCCCTGCTCCTTTTAAGCAATTTCTGGAGATTGTTGTGAACATGAAATTTGATGAAGAGCCCAACTATTCCAAGCTAATATCCTTGTTTGATGGCATGATCGGATCAAATCCTGCATTGCGACCAATTAATACTGAAGGTGCTCAAAAGGTTGGGCAAAAGCGGGGCAGATTGAATTTGGAGGAAGGTGATTCAGTCCCTAAAAAGAAGGTTCGTTTAGGGGTTCCTGCTACCCAATGGATATCAATTTACAATGCGAGACAGCCTATGAAACAAAGATATCATTACAATGTAGCTGATGCAAGGTTAGCACAGCACGTGGAGAGAGGGATTACAGATGGCCTCCTCATCAGCTGTGTGGCCTCCTGTTCCAATCTTTGGGCACTTATTATGGATGCTGGAACTGGTTTTACAACTCAAGTTTACAAGTTGTCACCTTCCTTCTTACACAAGGAATGGATCATGGAGCAGTGGGAAAAGAACTTCTACATCACATCTATTGCTGGGGCCAATAATGGGAGCTCTCTTGTGGTGATGTCAAAAGGTACACAATATACTCAACAGTCATACAAAGTAAGTGATTCTTTCCCCTTCAAATGGATAAACAAGAAGTGGAAAGAAGGTTTTCACGTGACCTCAATGGCAACTGCCGGAAGTCGTTGGGGTGTTATTATGTCAAGAAATTCTGGATTTAGTGACCAGGTGGTTGAACTTGATTTCCTCTATCCAAGTGACGGCATCCACAGGCGTTGGGATAATGGTTACAGGATAACAGCAACTGCTGCTACATGGGATCAAGCTGCTCTTATATTAAGCATTCCACGACGCAGACCCAGTGATGAAACACAGGAAACTTTGCGTACATCTCAATTTCCCAGTACACATGTTAAGGAGAAATGGTCAAAAAACCTCTATCTTGCTTGTTTGTGCTATGGGCGCACAGTATGCTGA 2055 0.4501 MPEPRIGVRRGGAALNRSSQEAPARKYVKTRAAVAREAAAAAAKERPRTRLAVKKLKQKKPVIVISESSSGINRVKENRAKEEVEGIMGDGSGGLSANKGVKQDDGNAAPFPEKVQVGGSPMYKIDRKLGKGGFGQVFVGRRITGGNERLTGAGATEVALKFEHRNSKGCNYGPPYEWQVYNTLGGSHGIPKVHYKGRQGEYYIMVMDMLGPSLWDVWNSSSQSMSAEMVACIAVESLSILEKMHLRGYVHGDVKPENFLLGQPATPQEKKLFLVDLGLATKWRDTSSGQHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKSFLVCKKKMGTSPEMMCCFCPAPFKQFLEIVVNMKFDEEPNYSKLISLFDGMIGSNPALRPINTEGAQKVGQKRGRLNLEEGDSVPKKKVRLGVPATQWISIYNARQPMKQRYHYNVADARLAQHVERGITDGLLISCVASCSNLWALIMDAGTGFTTQVYKLSPSFLHKEWIMEQWEKNFYITSIAGANNGSSLVVMSKGTQYTQQSYKVSDSFPFKWINKKWKEGFHVTSMATAGSRWGVIMSRNSGFSDQVVELDFLYPSDGIHRRWDNGYRITATAATWDQAALILSIPRRRPSDETQETLRTSQFPSTHVKEKWSKNLYLACLCYGRTVC 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1887 684 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 78 654 - -
Sto12g1887 684 Gene3D Transferase(Phosphotransferase) domain 1 96 437 - -
Sto12g1887 684 SUPERFAMILY Protein kinase-like (PK-like) 123 407 IPR011009 -
Sto12g1887 684 SMART serkin_6 123 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1887 684 MobiDBLite consensus disorder prediction 86 113 - -
Sto12g1887 684 CDD STKc_CK1 122 398 - -
Sto12g1887 684 PANTHER CASEIN KINASE-RELATED 78 654 - -
Sto12g1887 684 MobiDBLite consensus disorder prediction 1 28 - -
Sto12g1887 684 ProSiteProfiles Protein kinase domain profile. 123 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1887 684 Pfam Protein kinase domain 123 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto12g1887 684 ProSitePatterns Protein kinases ATP-binding region signature. 129 161 IPR017441 GO:0005524
Sto12g1887 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1887 Sto-Chr12 14723603 14734929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1887 123 280 EF-hand Containing Proteins AT4G36070 29.878 1.76e-08 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Sto12g1887 Pkinase 3.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1887 - - gmx:100819969 1213.36