Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1831 ATGGATGAGAAAGTCCAAAAGAAAAGATCTAAATTTGACAGAAATAAGGACAAGGATATGCCACTGAATGATGGAATGGATCTTGGACATAGTATAGAGGTGGAGCCaaatagagaaaagaaaaagaagcataaggataaaaagaaaaaatgcaaGACTGATAAAATGTTCAATTCAAATGAAGTTGCACAGGAAGATTCTACAGGTATCTCAGCTAAGGGACAGAGATGCACCGTTGAACAGGATTTTACATTTAAGAGGAATGAGGAAGAAGAGAATGAGAAAagtaagaggaagaagaaggagaggaatAACAATGATGATCAAGGGAACccaataaagaagaagaagaaactgagcaacaaaagcaaaagaaCAGAAGATAGTGAATTCAAAAGCCATGGCGGTGATCCAGTTTTAGATGAAAGTATAGAGGTGGAGCCaaatagagaaaagaaaaagaagcataaggataaaaagaaaaaatgcaaGACTGATAAAATGTTCAATTCAAATGAAGTTGCTCAGGAAGATTCTACAGGTATCTCAGCTAAGGGACAGAGATGCACCATTGAACAGGATTTTACATTTAAGAGGAATGAGGAAGAAGAGAATGAGAAAAgtaagaggaagaggaagaaggagaggaaTAACAATGATGATCAAGGGAACccaataaagaagaagaagaaactgagcaacaaaagcaaaagaaCAGAAGATAGTGAATTCAAAAGCCATGGCGGTGATCCAGTTTTAGATGAAAGTAATGAAGGTGATTTGAATTTTGTAGGTATCAATATGAGAGATGCTAGTGCACATTCTATTGCTACTGAAGTTGATGATCAATgcatgaagaagaaggaaaagaagaagaagaagaagaaggaaaagaagaagaagaagagcaaggaAGATAAATGTGACTCCGGAGGAAAAGTTTGTGATTCCATGGAAGATGCTAATAATTCTCCTCATCTTGCACCTGAAGGAGCTTCTAAGCGAGTAACTTTTTCTGATCATGTTGAGGTTTTCAGTGATGACTTAGTGCGAGGGAAAAGGTATACGCCAGAAGAAGATGAGAAGATTAAAGAGGCTGTTTACAACTATATAGAGTCTCATGGTTTGGGTGATGAAGGCCTAGATATGGTTCTAAATTGCAAGTATCATTCTAAGGTTAAAAATTGTTGGAAAGAAATTGCACTGGCTCTACCTCATAGGCCTCGTGAAAGCATATATAACCGGGCTCATTGTTTGTTTGAAAGAGATGAATCTCATAAGTGGACTCCTGAAGAATACGAGATGATACTTAAGTATACGGAAAAACATGGATCTAATTGGAAAACATTGGCTGATGCAATGGGGAAACATCGTTATCATGTAAAGGATACATGGCGGAGGATAAAATTTGGCAATAAAAACAAAGGAAGGTGGACACAAGAGGAGTATcagaaattatttgatttagtGAACACTGATCTACGCCTGAGGGCTTTAGAAGATTGTAGAAAACTAAAGCATGGTGGTTTAATGGGTGATCATCAAAAGCATAGAATTCTGATGGTCTCTGATTTTTTCTATCCCAACTTTGGTGGTGTGGAGAACCATATATATTATCTCTCGCAATGCCTGCTGAAGTTAGGTCACAAGGTGGTGGTTGTAACTCATGCTTATGGAAATCGATCTGGGATTAGATATATGACTGGAGGCCTGAAGGTCTACTATGTGCCATGGAGACCATTTCTTATGCAGAATACGCTACCAACCATCTATGGGTTATTACCAATTATAAGGACTATTCTCATTCGAGAAAGAATAAATATAGTGCATGGACATCAAGCCTTTTCAACACTTTGTCATGAAGCTCTGATGCATGCAAGAACCATGGGGTACAAGGTTGTGTTTACAGATCATTCACTGTATGGTTTTGCAGACATTGGAAGCATCCACATGAACAAAGTTTTGCAGTTTACCTTGGCAGATTTGAGTCAAGCCATCTGTGTTTCCCATACAAGCAAGGAAAACACTGTGTTGCGGTCAGGTTTGCCACCAGAAAAGGTTTTTGTCATACCTAATGCTGTTGATACTGCCATGTTCAAGCCAGCTGAAAAGCGTCCAAGCAGAGAAGAAATTGTTATCGTTGTTATAAGTCGATTGGTTTACCGGAAGGGTGCTGATTTGCTTGTTGAAGTCATTCCAGAAGTATGCCGCTTACATCCCAATgtTCGTTTCATTATTGGAGGGGATGGACCTAAGCGGGTACGGTTGGAAGAGATGAGAGAAAAGCATTCTCTTCAAGATCGAGTTGAAATGTTGGGAGCTGTGCCACATGCACAAGTTCGATCCGTTCTAATTTCTGGACATATTTTCTTAAACAGTTCCTTAACTGAAGCATTTTGTATAGCCATATTGGAGTCTGCCAGTTGTGGATTGTTAACAGTCAGCACTCGTGTTGGAGGTGTCCCTGAGGTTTTACCAGATGACATGATTGTTTTGGCTGAACCTGATCCTAGTGATATGGTGCAAGCAATTGGGAAGGCAATATCTATGCTGCCAGATATCGATCCACAAGTCATGCACAATCGAATGAGGAAACTCTATAACTGGCATGATGTTGCCAAGAGGACTGAAATTGTATATGATCGTGCTCTGAAGTGCTCTAATCAAAGTCTGCTAGAACGTCTCTCACGGTACACTCTAAACATCTTATATCAAAAGCAATTTAATGGCAGTATAAAACTTTTAGGATACCTCTCTTGTGGATCATTTGCGGGCAAGCTCTTCTGCTTGGTTATGATTGTTGGTTTTTTGCTATGGCATCTATTGGAACTATGGCAGCCTGCAGATGAGATTGAGGAGGTCCCAGATGTTATTCTTCCGGACGACTGTGATCAAGAAATGTTGCATAAAGGCCAATGA 2919 0.357 MDEKVQKKRSKFDRNKDKDMPLNDGMDLGHSIEVEPNREKKKKHKDKKKKCKTDKMFNSNEVAQEDSTGISAKGQRCTVEQDFTFKRNEEEENEKSKRKKKERNNNDDQGNPIKKKKKLSNKSKRTEDSEFKSHGGDPVLDESIEVEPNREKKKKHKDKKKKCKTDKMFNSNEVAQEDSTGISAKGQRCTIEQDFTFKRNEEEENEKSKRKRKKERNNNDDQGNPIKKKKKLSNKSKRTEDSEFKSHGGDPVLDESNEGDLNFVGINMRDASAHSIATEVDDQCMKKKEKKKKKKKEKKKKKSKEDKCDSGGKVCDSMEDANNSPHLAPEGASKRVTFSDHVEVFSDDLVRGKRYTPEEDEKIKEAVYNYIESHGLGDEGLDMVLNCKYHSKVKNCWKEIALALPHRPRESIYNRAHCLFERDESHKWTPEEYEMILKYTEKHGSNWKTLADAMGKHRYHVKDTWRRIKFGNKNKGRWTQEEYQKLFDLVNTDLRLRALEDCRKLKHGGLMGDHQKHRILMVSDFFYPNFGGVENHIYYLSQCLLKLGHKVVVVTHAYGNRSGIRYMTGGLKVYYVPWRPFLMQNTLPTIYGLLPIIRTILIRERINIVHGHQAFSTLCHEALMHARTMGYKVVFTDHSLYGFADIGSIHMNKVLQFTLADLSQAICVSHTSKENTVLRSGLPPEKVFVIPNAVDTAMFKPAEKRPSREEIVIVVISRLVYRKGADLLVEVIPEVCRLHPNVRFIIGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILESASCGLLTVSTRVGGVPEVLPDDMIVLAEPDPSDMVQAIGKAISMLPDIDPQVMHNRMRKLYNWHDVAKRTEIVYDRALKCSNQSLLERLSRYTLNILYQKQFNGSIKLLGYLSCGSFAGKLFCLVMIVGFLLWHLLELWQPADEIEEVPDVILPDDCDQEMLHKGQ 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1831 972 MobiDBLite consensus disorder prediction 1 259 - -
Sto12g1831 972 Gene3D - 429 469 - -
Sto12g1831 972 Gene3D Glycogen Phosphorylase B; 706 865 - -
Sto12g1831 972 Pfam Myb-like DNA-binding domain 428 486 - -
Sto12g1831 972 Coils Coil 198 220 - -
Sto12g1831 972 MobiDBLite consensus disorder prediction 122 152 - -
Sto12g1831 972 SUPERFAMILY Homeodomain-like 426 486 IPR009057 -
Sto12g1831 972 PANTHER N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL BIOSYNTHETIC PROTEIN 513 959 - -
Sto12g1831 972 CDD GT4_PIG-A-like 518 932 IPR039507 GO:0000506|GO:0006506|GO:0017176
Sto12g1831 972 MobiDBLite consensus disorder prediction 57 78 - -
Sto12g1831 972 Coils Coil 86 106 - -
Sto12g1831 972 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 518 884 - -
Sto12g1831 972 MobiDBLite consensus disorder prediction 282 331 - -
Sto12g1831 972 Gene3D - 350 422 - -
Sto12g1831 972 MobiDBLite consensus disorder prediction 169 190 - -
Sto12g1831 972 CDD SANT 427 460 IPR001005 -
Sto12g1831 972 PANTHER N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL BIOSYNTHETIC PROTEIN 513 959 - -
Sto12g1831 972 SMART sant 351 422 IPR001005 -
Sto12g1831 972 SMART sant 424 471 IPR001005 -
Sto12g1831 972 Coils Coil 284 307 - -
Sto12g1831 972 Pfam PIGA (GPI anchor biosynthesis) 556 645 IPR013234 GO:0006506
Sto12g1831 972 ProSiteProfiles Myb-like domain profile. 427 469 IPR001005 -
Sto12g1831 972 MobiDBLite consensus disorder prediction 235 254 - -
Sto12g1831 972 MobiDBLite consensus disorder prediction 1 24 - -
Sto12g1831 972 CDD SANT 354 420 IPR001005 -
Sto12g1831 972 Gene3D Glycogen Phosphorylase B; 509 705 - -
Sto12g1831 972 MobiDBLite consensus disorder prediction 192 228 - -
Sto12g1831 972 Pfam Glycosyl transferases group 1 706 849 IPR001296 GO:0016757
Sto12g1831 972 MobiDBLite consensus disorder prediction 80 115 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1831 511 959 Glycosyltransferase AT3G45100 79.955 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto12g1831 Glycos_transf_1 4.9e-26 CL0113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1831 K03857 - gmx:100775466 799.66