Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1819 TTGAATTCCTTTAGGACAGCATTAGATATTGAGCCAAACCACGTACCGAGTTTAATATCCGCCGCCCGTGTCCTCGGGCATCTCGGCGGTCAATCATCGTCGGTATCGAGAAGCCTACTCTCCGAAGCTCTCCGGCTCGATAGAACAAATCCGTCTGCTTGGTACAATCTTGGATTGCTTTACAAAGCTGATAAGGGGACCTCAGCACTGGAAGCTGCTGAATGCTTTGAGGTAGCAGCCCTTCTTGAAGAGTCTTCTCCAATTGGACCCTTCAGATAG 279 0.4946 LNSFRTALDIEPNHVPSLISAARVLGHLGGQSSSVSRSLLSEALRLDRTNPSAWYNLGLLYKADKGTSALEAAECFEVAALLEESSPIGPFR 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1819 92 SUPERFAMILY TPR-like 3 82 IPR011990 GO:0005515
Sto12g1819 92 Gene3D - 1 87 - -
Sto12g1819 92 PANTHER OS10G0471400 PROTEIN 1 92 - -
Sto12g1819 92 PANTHER PROTEIN NPG1 1 92 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1819 Sto-Chr12 13972293 13972571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1819 1 92 Calmodulin-binding Proteins AT4G28600 54.255 7.91e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1819 K21843 - gmx:100789469 145.976
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1819 12 13972293 13972571 Sto12g1819 12 13972293 13972571 ECH