Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1805 ATGCCGGCCGGACATGGTTTGCGATCTCGTACTCGAGATTCCTTCTCGCGGCCATTCCGGAAGAAGGGCACCATAGCCCTCACCACTTATCTTCGCACCTACAAAATCGGAGATTACGTCGACATCAGGGTTAATGGCGCCGTCCACAAGGGTATGCCGCACAAGTTCTATCACGGTCGCACTGGTCGTGTCTGGAACGTTACCAAGCGGGCTATTGGCGTTGAGGTCAACAAGCAGGTTGGCAACAGGATAATCAGGAAGAGAATTCATGTACGTGTTGAGCATGTGATGCCTTCGAGGTGCACTGAGGAGTTCCGTCTGAGGAAAATCAAGAATGATCAGTTGAAGGCTGAGGCAAAGGCAAAGGGAGAGGTCATCAGCACCAAGAGACAGCCCGAGGGTCCTAAACCAGGTTTCATGGTGGAAGGTGCTACATTGGAGACGGTAACACCCATTCCATACGATGTCGTCAATGATCTTAAAGGCGGTTACTAG 495 0.5152 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYKIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGEVISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1805 164 PANTHER 60S RIBOSOMAL PROTEIN L21-1 1 164 - -
Sto12g1805 164 SUPERFAMILY Translation proteins SH3-like domain 3 99 IPR008991 -
Sto12g1805 164 ProSitePatterns Ribosomal protein L21e signature. 37 62 IPR018259 GO:0003735|GO:0005840|GO:0006412
Sto12g1805 164 Gene3D - 99 156 - -
Sto12g1805 164 Gene3D Ribosomal protein L21 1 97 IPR036948 GO:0003735|GO:0005840|GO:0006412
Sto12g1805 164 PANTHER 60S RIBOSOMAL PROTEIN L21 1 164 IPR001147 GO:0003735|GO:0005840|GO:0006412
Sto12g1805 164 Pfam Ribosomal protein L21e 1 101 IPR001147 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1805 Sto-Chr12 13729661 13731177 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1805 1 164 Cytoplasmic Ribosomal Protein Gene Family AT1G09690 84.146 1.55e-105 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1805 K02889 - gmx:100305629 329.717