Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1804 ATGGTGCCGGTATCACATGGCTGTCACGTGATCGGACACCGTGTGATCAAGGGTGGTTCAGATTTAGATTCGGATTCGGATTCAGATTCCGTTGTGGTGCAGAGAGAACAAATGGAAAACGCAGAGTTGTGGTATTTTGGAATCTTTGATTCCTTGATTGGAGATGGAGTCACCAAGTATATGCAATCACATTTCTTCCAGAAGCAGCTTAAAGAGTCTCACGTAAGTAAAAAGTGCAAGGAGACGCTGAAGAAAGCTTACCTTAACGCAAGGGCCAAAATGAGAGAGCAAGAAAAATCAGACGAGAGATGTAGTAATAGAATGAGTTCGGCATCAGTTATTGTGGTAAATGGAGAAAAGCTTGTGATGGCTAACATGGGGAATTACAGAGCCGTAGTGTGCAGAGATGGGATTGCATATGACAAAAATGGAAGACACCAACAATCAGCCAAAAGACACTATTGGACTCGCAGGCTCTTTTCCGTACGGATACTAGCATGTGACTCAGGCGCGGCTACAAGGCATTCTAAAAGCTCAGAACTTGTGGTGGCAGCTGAAAGGATCGATTCTGACACCGAATTTTTGATCTTAGCAAGTCATGGCATATGGGAGGTGATGAAGAACCAAGAGGCAGTGAATCTCATTAGACACATAGAGGATCCACAAGAAGCTGCTGAGTGCTTGGCCAAGGAAGCACTCATTAGGATGAGCAGAAGCAACATCTCATGCATCATTATTCGCTTCGACTAG 750 0.4453 MVPVSHGCHVIGHRVIKGGSDLDSDSDSDSVVVQREQMENAELWYFGIFDSLIGDGVTKYMQSHFFQKQLKESHVSKKCKETLKKAYLNARAKMREQEKSDERCSNRMSSASVIVVNGEKLVMANMGNYRAVVCRDGIAYDKNGRHQQSAKRHYWTRRLFSVRILACDSGAATRHSKSSELVVAAERIDSDTEFLILASHGIWEVMKNQEAVNLIRHIEDPQEAAECLAKEALIRMSRSNISCIIIRFD 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1804 249 ProSiteProfiles PPM-type phosphatase domain profile. 23 248 IPR001932 -
Sto12g1804 249 Pfam Protein phosphatase 2C 185 241 IPR001932 -
Sto12g1804 249 Pfam Protein phosphatase 2C 40 140 IPR001932 -
Sto12g1804 249 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 44-RELATED 1 248 - -
Sto12g1804 249 PANTHER ALPHABET, ISOFORM E-RELATED 1 248 - -
Sto12g1804 249 SMART PP2C_4 15 246 IPR001932 -
Sto12g1804 249 Coils Coil 80 100 - -
Sto12g1804 249 Gene3D - 22 249 IPR036457 -
Sto12g1804 249 CDD PP2Cc 45 248 IPR001932 -
Sto12g1804 249 SUPERFAMILY PP2C-like 29 249 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1804 Sto-Chr12 13709468 13720640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1804 1 248 PP2C-type Phosphatase Gene Family AT3G23360 47.012 1.29e-70 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1804 K19704 - gmx:100794054 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1804 12 13709468 13720640 Sto12g1804 12 13709468 13720640 ECH