Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1714 ATGATAAAAACAATAGCATCTGGGCTTTCACTTTTGTCGGTCCTTATATGTGTATCTGCAACAGATAATGGATTTCCCAGATGTAACTGTGACGATGAGGCCAGCTTGTGGACTATTGATAGCATTTTGGAGTGCCAGAGAGTCAGCGATATCTTGATTGCTGTGGCCTACTTCTCCATTCCCGTTGAGCTGCTTTGTTTTATCAGTTGTGCGAATGTCCCATTTAAATGGGTCCTTATTCAGTTCATTGCCTTCATTGTACTATGTGGATTGACACATTTGCTGAATGGATGGACCTATGGCCCTCACTCTTTCCAGCTTATGGTGGCACTTACTGTCTTCAAAACTCTCACTGCCTTGGTATCATGTGCCACTGCTATCACACTCATGACACTAATTCCTTTGCTTCTCAAAGTGAAGGTCAGAGAATTGATGCTGAAGAAGAAGACCTGTGATCTTGGGCGAGAGGTTGGTCTTATACTGAGGCAAAAAGAAGCTGCAATACATGTTCGAATGCTTACACAAGAGATTCGCAAGTCACTTGACAGGCATACAATTCTATACACCACTTTGGTGGAGCTGTCTAAAACCCTTGGTTTGCAAAACTGTGCAGTCTGGATGCCTAATATAGATAGAACAGAGATGAATCTCACTCATGAATTGAATGgaagaaatattaatttttctatacCAATTACTCATCAAGATGTTGTGAGAATCAAGGGAAGTGATGAAATAAATATTCTTAGTCCTGACTCATCACTTGCTACCGCCAGTAGCGGAATTTCTAGTGAGGCAGGACCAGTGGCTGCAATTCGAATGCCAATGCTTCGGGTATGCAATTTCAAAGGTGGAACACCTGAGCTAAGGCAGGCATGTTATGCAATATTAGTTTTGATTCTTCCCAGTGGAGAGCCTAGATCTTGGAGCCTACAGGAGCTGGAAATAATTAAGGTGGTTGCTGATCAGGTTGCTGTGGCTCTCTCTCATGCTGCAATTCTTGAAGAGTCCCAACTCATGAGAGAGAAGTTGGAGGAGCAAAATCGAGCACTGCAACAGGCAAGAAGGAATGCTATGATGGCAAGTCAGGCACGAAACTTATTTCAGAAAGTCATGAGTGACGGAATGAGAAGGCCTATGCACTCAGTTTTGGGTTTGCTTTCAATTATACAAGATGAGAATTTGAAGAGTGAACAGAAACTCATTGTGGATGCAATGTTGAGGACCAGCAATGTCCTATCAAACTTGATAAATGATGCTATGGACATTTCAGCTAAGGATGATGGAAGATTCCCATTGGAGATGAGATCTTTTGGGTTACATGCCATAATTAAAGAAGCTGCATGCCTTGCTAAGTGTCTGTCTGTTTACAGGGGTTTCGATTTTAAAGTCGAGTGTGAGAAGTCTTTGCCGGACAATGTTATGGGTGATGAGAGGAGGGTTTTTCAGGTGATTCTACATATGGTTGGGAACTTGCTGGATTGTAACCACAGGGGAGGGATTCTTGTACTTCGTGTAATTACAGAAAGAGGAAGTCAGGGAAGGAGTGAACATGGGTGGACAACCTGGAGACCAAGCTCATCTAGTGGGGATGTAAATATTAGATTCGAGATAGGGATCAATAGTAGTGATTCTGAATTGGAGAGCTCACTTTCTTTAGTACATGGTGGTAGGAAATATACCAGTAATAGAGTTGAAGTCAGATTGAGCTTCAGCATTTGCAAGAAGATAGTTCAGTTGATGCAAGGGAACATATGGTTCGTGCCAAATGCCCAAGGTTTTCCTCAAACCATGGCCCTTGTTCTTCGGTTTCAATTACAATCATCTATTTCTATTGCTATATCTGAATCGGCCGAGACGTCAGAGCGTACagattctaattctcttctaaGAGGTCTGCAAGTCTTGTTGGCTGACAATGATGATGTAAATAGAGCTGTGACTCAAAAGTTGCTTCAGAAGCTAGGTTGTGTTGTAACTTCTGTTTGTTCAGGATTCGAATGCCTTTCCGTCTTTGGATCTGCTGGATCTTCTTTTCAAGTCATTCTTCTGGATCTTCATATGCCTGAGTTAGACGGCTTTGAAGTTGCCATGAGGATTCGAAAGTTTAGAAGCCGAAATTGGCCTGTGATAGTTGCCTTGACTGCAAATGCAGATGAAGATTTGTTGGAAAGATGTATGCAAATGGGTATTAATGGATTCATCAGAAAACCTGTTTTGTTGCAAGGAATCGCTGGCGAATTTCGGAGGATTCTGATGCAGGGAAATAAAGTCCTGTGA 2280 0.4167 MIKTIASGLSLLSVLICVSATDNGFPRCNCDDEASLWTIDSILECQRVSDILIAVAYFSIPVELLCFISCANVPFKWVLIQFIAFIVLCGLTHLLNGWTYGPHSFQLMVALTVFKTLTALVSCATAITLMTLIPLLLKVKVRELMLKKKTCDLGREVGLILRQKEAAIHVRMLTQEIRKSLDRHTILYTTLVELSKTLGLQNCAVWMPNIDRTEMNLTHELNGRNINFSIPITHQDVVRIKGSDEINILSPDSSLATASSGISSEAGPVAAIRMPMLRVCNFKGGTPELRQACYAILVLILPSGEPRSWSLQELEIIKVVADQVAVALSHAAILEESQLMREKLEEQNRALQQARRNAMMASQARNLFQKVMSDGMRRPMHSVLGLLSIIQDENLKSEQKLIVDAMLRTSNVLSNLINDAMDISAKDDGRFPLEMRSFGLHAIIKEAACLAKCLSVYRGFDFKVECEKSLPDNVMGDERRVFQVILHMVGNLLDCNHRGGILVLRVITERGSQGRSEHGWTTWRPSSSSGDVNIRFEIGINSSDSELESSLSLVHGGRKYTSNRVEVRLSFSICKKIVQLMQGNIWFVPNAQGFPQTMALVLRFQLQSSISIAISESAETSERTDSNSLLRGLQVLLADNDDVNRAVTQKLLQKLGCVVTSVCSGFECLSVFGSAGSSFQVILLDLHMPELDGFEVAMRIRKFRSRNWPVIVALTANADEDLLERCMQMGINGFIRKPVLLQGIAGEFRRILMQGNKVL 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1714 759 Pfam His Kinase A (phospho-acceptor) domain 366 428 IPR003661 GO:0000155|GO:0007165
Sto12g1714 759 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 349 430 IPR036097 GO:0000155|GO:0007165
Sto12g1714 759 Gene3D - 330 427 - -
Sto12g1714 759 SMART gaf_1 182 338 IPR003018 GO:0005515
Sto12g1714 759 Gene3D - 428 608 IPR036890 -
Sto12g1714 759 ProSiteProfiles Histidine kinase domain profile. 371 604 IPR005467 -
Sto12g1714 759 CDD REC_ETR-like 633 747 - -
Sto12g1714 759 ProSiteProfiles Response regulatory domain profile. 634 752 IPR001789 GO:0000160
Sto12g1714 759 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 476 589 IPR003594 -
Sto12g1714 759 Gene3D - 612 750 - -
Sto12g1714 759 SUPERFAMILY CheY-like 631 750 IPR011006 -
Sto12g1714 759 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 10 757 - -
Sto12g1714 759 Gene3D - 162 329 IPR029016 -
Sto12g1714 759 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 433 591 IPR036890 -
Sto12g1714 759 CDD HisKA 362 424 IPR003661 GO:0000155|GO:0007165
Sto12g1714 759 SMART HisKA_10 364 429 IPR003661 GO:0000155|GO:0007165
Sto12g1714 759 Pfam GAF domain 182 328 IPR003018 GO:0005515
Sto12g1714 759 Coils Coil 334 364 - -
Sto12g1714 759 PANTHER ETHYLENE RESPONSE SENSOR 2 10 757 - -
Sto12g1714 759 SUPERFAMILY GAF domain-like 185 331 - -
Sto12g1714 759 SMART REC_2 633 752 IPR001789 GO:0000160
Sto12g1714 759 PIRSF Ethylen_sen_hybr_HK 1 759 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Sto12g1714 759 CDD HATPase_ETR2_ERS2-EIN4-like 470 602 - -
Sto12g1714 759 Pfam Response regulator receiver domain 635 739 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1714 Sto-Chr12 12775929 12779170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1714 22 752 Miscellaneous Gene Families AT3G04580 58.356 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto12g1714 GAF 9.3e-13 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1714 K14509 - gmx:100787425 1227.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1714 12 12775929 12779170 Sto12g1714 12 12775929 12779170 ECH